| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1792 |
|---|
| Symbol | |
|---|
| ID | 6461755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1892899 |
|---|
| End bp | 1893159 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642728007 |
|---|
| Product | addiction module toxin, Txe/YoeB family |
|---|
| Protein accession | YP_002018641 |
|---|
| Protein GI | 194336847 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4115] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02116] toxin-antitoxin system, toxin component, Txe/YoeB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00863649 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACCA TACTCTTCAT GACCCAGGCT CAAAAGGATG CAAAAAAACT TGGGGCGAGT
GGTTTGAAGA AAAAAGTGCT TCAATTAATA AATATTATCA AGGATAATCC CTACAAATAT
CCGCCTGAGT TTGAATATTT AAAGGGTGAT ATGAAGGGAT TGATCAGTAG AAGGATTAAC
AAACAACATC GCCTTGTCTA CGAAGTTATT GAAGAGGCCA AGATCATTAA GGTGTATCGC
ATGTGGACTC ATTATGAATA A
|
|---|
| Protein sequence | MYTILFMTQA QKDAKKLGAS GLKKKVLQLI NIIKDNPYKY PPEFEYLKGD MKGLISRRIN
KQHRLVYEVI EEAKIIKVYR MWTHYE
|
|---|
| |