Gene Ppha_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1770 
Symbol 
ID6462877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1870562 
End bp1871170 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content47% 
IMG OID642727982 
Producthypothetical protein 
Protein accessionYP_002018619 
Protein GI194336825 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATG AACGACTCCT CATTATCTTC AGCAAAAACC CTGAAGCTGG GCAAGTAAAA 
ACCCGCCTTG CGCGAGATGT CGGAGAAAAA AAAGCCCTTG AGATTTATGA AATTCTCAGG 
GAGCATACCG CTCTCGTGAC TGCGAAGGTT AGTGCTGAAC GAATGGTATT TTACTCCAGC 
TTTATCCCCT CCTCTGATCT CTTTCGCACA ACAACATTCA GCTTTCGCCT GCAAGAGGGA 
GCTGACTTGG GGGAGCGGAT GTTTCATGCC ATACGCAGTG GATTTGAAGC CGGTTTTCGC 
CACATCGTAC TCATCGGAAC AGACTGTTAC GAACTGAGCA GCGAAATTCT TGACCAAGCA 
TTCAGCGCTC TTGAACGATC TGATGCTGTT GTTGGGCCTG CCACTGATGG CGGCTTTTAC 
CTTATCGGAC TGAACAGGCT GATACCAGAA CTCTTTCTCA ACCGAGAGTG GAGCAATTCT 
GCGGTTCTCA GGGAGAGCAT CAGAATTCTT CAGTGCCATG AAACTCCATA CGAGTTGCTT 
TCGGAGCTTT CGGATATTGA TACCTTCGAT GACCTGAAAA AAAGCAGATT ATGGATACAA 
CAACCTTAA
 
Protein sequence
MNDERLLIIF SKNPEAGQVK TRLARDVGEK KALEIYEILR EHTALVTAKV SAERMVFYSS 
FIPSSDLFRT TTFSFRLQEG ADLGERMFHA IRSGFEAGFR HIVLIGTDCY ELSSEILDQA 
FSALERSDAV VGPATDGGFY LIGLNRLIPE LFLNREWSNS AVLRESIRIL QCHETPYELL 
SELSDIDTFD DLKKSRLWIQ QP