| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1769 |
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| Symbol | |
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| ID | 6462878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1869192 |
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| End bp | 1870553 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727981 |
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| Product | Carotene 7,8-desaturase |
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| Protein accession | YP_002018618 |
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| Protein GI | 194336824 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02731] phytoene desaturase
[TIGR02732] carotene 7,8-desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG CAATTTTCGG AGCAGGAGTT GCTGGCCTTA GTGCAGCAAT AGAGCTTGTG
GATCGTGGAC ACACGGTAGA GATTTATGAA AAACGCAAGG TACTTGGCGG TAAGGTTTCC
GTCTGGAAAG ACAGCGAGGG TGACTCCATA GAATCAGGAC TTCATATTGT TTTCGGTGGT
TACGAACAGC TTCAGCAATA CCTTAAACGG GTCGGTGCGG AAGATAATTA TCAGTGGAAA
GAACATACCC TGATCTATGC TGAACCGAAT GGACAACAAT CTTTTTTCAA GAAGGCAAAC
CTTCCCAGTC CCTGGGCAGA GGTTATTGGC GGTCTGCAGA CCGATTTCCT TACAATGTGG
GACAAAATCT CCCTGATCAA AGGGCTCTAT CCTGCCCTTA CCGGCAATGA GGCCTATTTC
CGCAGTCAGG ACCATATGAC CTATTCGGAG TGGCACCGAT TGAGAGGAGC GTCGGAGCAT
TCGTTACAGA AACTCTGGCG GGCCATTGCT CTTGCCATGA ATTTCATTGA GCCGAATATC
ATCAGTGCAC GGCCGATGAT CACTATTTTC AAATATTTTG GCACCAATTA TACCGCAACC
AAGTTTGCCT TTTTCCGCAA AAATCCTGGC GATTCCATGA TTGAACCAAT GCGGCAGTAT
ATACAGAGCA AGGGTGGGCG CATTTTTGTT GATGCAAAAC TTAACCGGTT TGAACTCAAC
AGTGACGAGA GTATTAAAGG CGCCCTGCTG CAGGATGGCC ATAAAATCGA GGCTGATGCC
TATATTTCCG CCCTGCCTGT CCACAACATC AAAACCATTA TTCCCCGTGA GTGGCTCGCC
CATAAGTATT TCCGCAACTT GCATGAATTT GTTGGCAGCC CGGTCGCAAA CTGCCAGCTC
TGGTTCGACC GGAAAATTAC CGATACCGAT AATCTCATGT TTTCACAAGG CACGATTTTT
GCGACATTTG CTGATGTCTC AATCACTTGC CCTGACGACT TCCAGAATGG CTCCGGCACA
GCAAACGGTG GCAGCGTCAT GAGCCTGGTG CTTGCTCCGG CACACCAATT GATGGAGATG
CCCAACGAGG TAATTATTGA GCTTGTCATG AAAGATATTC ACGACCGCTT TCCTTTGTCA
CGTCAGGCAA TACTTCTCAA ATCAACCCTT GTCAAAATTC CCCAATCAGT CTACAAGGCG
GTACCCGATG TCGATAAATT CCGCCCTGAC CAGATCAGCC CTGTTAAAAA CTTTTTTCTG
GCTGGCGATT ATACTGACCA GCACTATCTG GCTTCCATGG AGGGTGCGGC ACTGAGCGGA
AAACTGGTGG CAGAAAAGCT TCTCAGCCGG TTCGGCAACT GA
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| Protein sequence | MKIAIFGAGV AGLSAAIELV DRGHTVEIYE KRKVLGGKVS VWKDSEGDSI ESGLHIVFGG
YEQLQQYLKR VGAEDNYQWK EHTLIYAEPN GQQSFFKKAN LPSPWAEVIG GLQTDFLTMW
DKISLIKGLY PALTGNEAYF RSQDHMTYSE WHRLRGASEH SLQKLWRAIA LAMNFIEPNI
ISARPMITIF KYFGTNYTAT KFAFFRKNPG DSMIEPMRQY IQSKGGRIFV DAKLNRFELN
SDESIKGALL QDGHKIEADA YISALPVHNI KTIIPREWLA HKYFRNLHEF VGSPVANCQL
WFDRKITDTD NLMFSQGTIF ATFADVSITC PDDFQNGSGT ANGGSVMSLV LAPAHQLMEM
PNEVIIELVM KDIHDRFPLS RQAILLKSTL VKIPQSVYKA VPDVDKFRPD QISPVKNFFL
AGDYTDQHYL ASMEGAALSG KLVAEKLLSR FGN
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