| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1732 |
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| Symbol | |
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| ID | 6462960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1838675 |
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| End bp | 1839607 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727947 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_002018584 |
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| Protein GI | 194336790 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.956731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACA ACGATAACCC AAACAGTACA GGCACGAAGA CCGAAAAGCT GATAACGCTT
GAAGATGCCT ATAGCTACTG TCGGCAGATT TCACAGCATC ATGCAAAAAC CTTCTATCTT
GCAAGTATGT TTCTGCCAAA AAAACAGCAG AAACCGATTT TCGCCATCTA CGCATTGCTG
CGCACGGTTG ATGACGTTGT CGATATGGCC GAGGTTAAAC TGAACAACGG CCTGATTACC
AGCGAAGAGA TCCAGAGGAT ACTTGAAGAG TGGAAATCAA AGCTTACAGC GTGCTACGGC
GGCAAAACCG GCAATGACCC CATCATGATT GCCTGGCACG ATACCCTGAA AAGCTATTCG
ATCCCGATAG AACTCCCGCT CGACCTGATG GATGGCGTTG CCATGGATAT CGAGTTCAAG
CCATTCGAGA CCTTCGATGA CCTCTACGTC TACTGTTACA AAGTTGCCGC CGTCGTCGGG
CTGATGACCT CCGAAATATT TGGCTACAGC GACAAACGGG CACTTGAACA TGCCATAGAG
CTTGGCATTG CCATGCAGTT GACCAACATC CTGCGCGACA TTGGCGAAGA TGTTGACCGT
GGCAGAATCT ACCTTCCGCT TGAGGATCTG CGCCGTTTCA ACTATTCGAA AGAGGAGATG
ATGCAGAAAA AAATAAACGA CAACTTTCTC AATCTGATGA AGTTTCAGAT CGAACGGGCA
AGAGGTTACT ACCGCTCCTC CGACAAAGGA ATCCCCATGC TTGAAAAAGA GAGCCGCTTT
GGTGTCGCCA TCAGCAGCGT CAACTATGGC AATATTTTAA CCGCCATTGA GAAAAACCAG
TACGATGTCT TTTCAACAAG GGCCTATCGC TCTTTTTTTC AGAAAATCAG CACCATACCC
TACGTCTGGC TGAAAACCCG TTCAGGCTCG TGA
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| Protein sequence | MNHNDNPNST GTKTEKLITL EDAYSYCRQI SQHHAKTFYL ASMFLPKKQQ KPIFAIYALL
RTVDDVVDMA EVKLNNGLIT SEEIQRILEE WKSKLTACYG GKTGNDPIMI AWHDTLKSYS
IPIELPLDLM DGVAMDIEFK PFETFDDLYV YCYKVAAVVG LMTSEIFGYS DKRALEHAIE
LGIAMQLTNI LRDIGEDVDR GRIYLPLEDL RRFNYSKEEM MQKKINDNFL NLMKFQIERA
RGYYRSSDKG IPMLEKESRF GVAISSVNYG NILTAIEKNQ YDVFSTRAYR SFFQKISTIP
YVWLKTRSGS
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