| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1730 |
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| Symbol | |
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| ID | 6462962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1836756 |
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| End bp | 1837175 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642727945 |
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| Product | protein of unknown function UPF0054 |
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| Protein accession | YP_002018582 |
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| Protein GI | 194336788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.90197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCAAA TCCATAATAC CACCAAAAAG GAGATTCCGG AGCAACTGCT TGAAAAAGCG
GTTCTTCTGG TTCTGGAAAA CGAAGGTTTT ACGGTTGAGT CGATTGTGGG TGTCTACTGC
GGCAACAAAA TGATCCAGCG CATTAACCGT GAGTTTCTCG GTCATGATTA TCCAACTGAT
ACCATTACCT TTCGTTACAA CAAAGGAGCT GAAATCGATG GGGAGTTTTA TATCTCGCTC
GATGTGGTGA AGGAAAATGC TGCCAGATTC TCGGTTGATT TTCAGCAAGA ACTTCTTCGT
GTTACCCTCC ATTCAGCGCT TCATCTTATC GGTTATGGTG ATCAGTCAGC CGAAGAACGG
AGACTGATTG AGGAAAAAGA GGCATTTTAT CTCACCCGTT CAGGAGCGGC AACACTATAA
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| Protein sequence | MLQIHNTTKK EIPEQLLEKA VLLVLENEGF TVESIVGVYC GNKMIQRINR EFLGHDYPTD
TITFRYNKGA EIDGEFYISL DVVKENAARF SVDFQQELLR VTLHSALHLI GYGDQSAEER
RLIEEKEAFY LTRSGAATL
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