Gene Ppha_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1718 
Symbol 
ID6462993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1828860 
End bp1829138 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content48% 
IMG OID642727934 
ProductProtein of unknown function DUF1778 
Protein accessionYP_002018571 
Protein GI194336777 
COG category[S] Function unknown 
COG ID[COG4453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.258746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC AAGCTGCCAA AACCGAAAAA CTTGATCTTC GCCTGTCACA GCAGGCCAAG 
CAGGTGTTAC GCAGCGCTGC AATTGCTTCA AATCGCACAT TAAGTGAATT TGTGCTGGAG
AGCGCTCTTT CTCGTGCAGA AGAGACGTTG GCCGATCGCC GTTCTTTTAG CCTTGATGTA
ACGCAATGGA CGGCATTTAT AGCAGCGCTT GATGCCTCTC CACGCGAGTT GCCAAGGCTC
AAGAAGCTTT TTCAGGAGCA GAGTATTTTC GAAAAGTAA
 
Protein sequence
MTTQAAKTEK LDLRLSQQAK QVLRSAAIAS NRTLSEFVLE SALSRAEETL ADRRSFSLDV 
TQWTAFIAAL DASPRELPRL KKLFQEQSIF EK