| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1712 |
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| Symbol | |
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| ID | 6463022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1824416 |
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| End bp | 1826869 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727928 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002018565 |
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| Protein GI | 194336771 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.347733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATA TCAAAAATCA ATTCAATGGC GGGACATTTA ATGATCCGAA ATTTATCTAT
GGTGGTAAGA CGATCAATAA ATACCTCGGG ACAATACCCT TCATTCCGCA AGTTTTCCAA
GGGCGAGAAG AAGACCTTGA AGCCATTCAC GACAAACTCT TCAATGGCAA CAATCTGCTG
CTGCTGGTCA ATGGAGAGGG CGGAATCGGC AAAACAACCC TGGCATCAAA GTACTATCAG
ACATATCATG AAGAGTACGC TCATTTAGCC TGGGTTTTCG CTGAAAAAAG TCTGCATGAT
GCCATTCTCA CCCTTGCATA TCCTTTGCAG GTTACCTTCT CCGAGAGAAT GACGGAAGAG
GAGCGGCTTC AGACGCTGCT TTGCGAAATG GCAGAACTGA AAAAGCCCTG CCTGCTGGTA
ATTGATAACG CCAACAGCCT TGATGATCTT GCATCGCATT GCCACGCGCT CAATGCCTGC
TCTAATTTTC ATCTTCTGCT TACGACGCGA ATCACTGAGT TTGAACATGC AGAGATACAT
GCAATCAAGC CGCTTGATGA AAAAAATGCC ATAACGCTTT TTGCAAGACT TTACCCAAAC
CATAATCGTA AAGAGGATAA CCTGCTTCAG AATATTTTGG AGGCGGTCGG CTACAACACG
CTCGTTATCG AACTGCTTGC AAAAAATCTT GGCAACTTCA ATAACAAGCT TCGCCAGCGA
TATACGCTAA GCGATTTGCT CAGTGACCTG CAAAAAAAGG GGCTGTTCGG GCTGAGCCAG
AGTGGCTCCG TCAGCATTGC CTATCACGGT GACGGGCTTG GCCTGCGCAA GGAGAAGCCG
GAAGCTATTC TTGCGGCAAT GTACGACCTC AGCGACCTTG AAGAGACTGA AAAAACGATA
CTCTCGGTTT TTGCAGTGCT ACCGGCTGAA CCAATAGGCT TTACAACACT TGAAGAGCTG
CTTCCCGGTT TCGACAATCT CGATATCACC CTGCTGAACC TGGCAAAAAA AGGATGGCTC
GAATTTAATA GCACAACCAA CAGCTTCAAG TGCAACCCTG TTGTGCAGGA AGTTACTCGA
ATCCAAAATA AGGATGAGCT TTTTGAGGAT TGCGAAGTGC TGATCACCAC GCTCGCCGAA
AAGCTTGAGT ATGAACCCGG AACTGGCCAT TTGCCAAATA TCAGCTATGA CAACGGAACC
CTTTATACGA GATACGCTGA AAGCGCATAT CATTATACTG CATTATTACG CAAAAAAGAA
ATAACAAGCC CATTGTTGGA GCGCATCGGG AATTTTTATA AAACAACAGG CAATCTCGAC
AAAGCACTGA CTTTCTTTGA CGAACGATCC CGTTTAGGTA AAGAACTCTA TGAGGCTTAT
CCGCAAAATG TCTCCTTCAA AAATGGGCTC GCCATTTCGT ATGAAAAACT CGGCGATACT
CACTCCGCTC TCGGCAATCT CGACAAAGCA CTGACTTTCT TTGACGATGA AACCCGATTA
TTTGAAGAGC TCTATGAGGC TTATCCGCAA AATGTCTCCT TCAAAAATGG GCTCGCCATT
TCGTATGAAA AACTCGGCGA TACTCACTCC GCTCTCGGCA ATCTCGACAA AGCACTGACT
TTCTTTGACG AACGATCCCG TTTAGGTAAA GAGCTCTATG AGGCTTATCC GCAAAATGTC
TCCTTCAAAA ATGGGCTCGC CATTTCGTAT TCTAAACTCG GCGAAACTCA CTCCGCTCTC
GGCAATCTCG ACAAAGCACT GACTTTCTTT GACGATGAAA CCCGATTATT TGAAGAGCTC
TATGAGGCTT ATCCGCAAAA TGTCTCCTTC AAAAATGGGC TCGCCATTTC GTATGAAAAA
CTCGGCGATA CTCACTCCGC TCTCGGCAAT CTCGACAAAG CACTGACTTT CTTTGACGAA
CGATCCCGTT TAGGTAAAGA GCTCTATGAG GCTTATCCGC AAAATGTCTC CTTCAAAAAT
GGGCTCGCCA TTTCGTATTC TAAACTCGGC GAAACTCACT CCGCTCTCGG CAATCTCGAC
AAAGCACTGA CTTTCTTTGA CGAACGATCC CGTTTAGGTA AAGAGCTCTA TGAGGCTTAT
CCGCAAAATG TCTCCTTCAA AAATGGGCTC GCCATTTCGT ATGAAAAACT CGGCGATACT
CACTCCGCTC TCGGCAATCT CGACAAAGCA CTGACTTTCT TTGACGAACG ATCCCGTTTA
GGTAAAGAAC TCTATGAGGC TTATCCGCAA AATGTCTCCT TCAAAAATGG GCTCGCCATT
TCGTATGTGA AGTTAGGCGT TTTCAACCGC GATGAACGCA GCGATGCAGC AAAAGCTCGC
CGGTACTTTG AGCAGGCAGA GGCGTTATGG GCTGAACTGG TGAAAAGTTA TCCCTCTTAT
GCTGAATTTC AACGGAACTG GTCATGGATA AAGGATAACC TGCACAACTT GTAA
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| Protein sequence | MTDIKNQFNG GTFNDPKFIY GGKTINKYLG TIPFIPQVFQ GREEDLEAIH DKLFNGNNLL
LLVNGEGGIG KTTLASKYYQ TYHEEYAHLA WVFAEKSLHD AILTLAYPLQ VTFSERMTEE
ERLQTLLCEM AELKKPCLLV IDNANSLDDL ASHCHALNAC SNFHLLLTTR ITEFEHAEIH
AIKPLDEKNA ITLFARLYPN HNRKEDNLLQ NILEAVGYNT LVIELLAKNL GNFNNKLRQR
YTLSDLLSDL QKKGLFGLSQ SGSVSIAYHG DGLGLRKEKP EAILAAMYDL SDLEETEKTI
LSVFAVLPAE PIGFTTLEEL LPGFDNLDIT LLNLAKKGWL EFNSTTNSFK CNPVVQEVTR
IQNKDELFED CEVLITTLAE KLEYEPGTGH LPNISYDNGT LYTRYAESAY HYTALLRKKE
ITSPLLERIG NFYKTTGNLD KALTFFDERS RLGKELYEAY PQNVSFKNGL AISYEKLGDT
HSALGNLDKA LTFFDDETRL FEELYEAYPQ NVSFKNGLAI SYEKLGDTHS ALGNLDKALT
FFDERSRLGK ELYEAYPQNV SFKNGLAISY SKLGETHSAL GNLDKALTFF DDETRLFEEL
YEAYPQNVSF KNGLAISYEK LGDTHSALGN LDKALTFFDE RSRLGKELYE AYPQNVSFKN
GLAISYSKLG ETHSALGNLD KALTFFDERS RLGKELYEAY PQNVSFKNGL AISYEKLGDT
HSALGNLDKA LTFFDERSRL GKELYEAYPQ NVSFKNGLAI SYVKLGVFNR DERSDAAKAR
RYFEQAEALW AELVKSYPSY AEFQRNWSWI KDNLHNL
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