Gene Ppha_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1709 
Symbol 
ID6463033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1823025 
End bp1823369 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content46% 
IMG OID642727925 
Producthypothetical protein 
Protein accessionYP_002018562 
Protein GI194336768 
COG category[S] Function unknown 
COG ID[COG4634] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCT GGATTGATGC ACAACTATCC CCCTCTATTG CTGCATGGAT CAACCGCAGC 
TATCCGAATA TTCAGGCACA ATCACTGAGG TCTCTCGATC TTCAGCGAGC GGATGATCTT
GCCATATTTG ATGCCGCAAA ACATACCGAA GCAGTGATCA AGAGTAAAGA TTCGGATTTC
CTGAAACTTG TCGATCAGTT CGGCACGCCG CCTCAAATCA TCTGGATCAC TTGTGGTAAC
ACCTCGAACA ACAGAATGAG AGCTGTTCTT GAAAAATCTC TTGAAAAGGC TGTGGAATTG
ATACGTTCAG GCGAGCCGAT CGTGGAAATC GGTGACAAAG CCTGA
 
Protein sequence
MIIWIDAQLS PSIAAWINRS YPNIQAQSLR SLDLQRADDL AIFDAAKHTE AVIKSKDSDF 
LKLVDQFGTP PQIIWITCGN TSNNRMRAVL EKSLEKAVEL IRSGEPIVEI GDKA