| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1704 |
|---|
| Symbol | |
|---|
| ID | 6463041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1820141 |
|---|
| End bp | 1821337 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642727920 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002018557 |
|---|
| Protein GI | 194336763 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATCG CAGAACTCAT TCTGAAAGGC ATGCTTGTCG TTCTGGCTCT TCCAGCCGCT
TATCTGCTGC TGAGCACGGT TGCTGCATAC TTTTTTAAAA AAGAGAGCTC CCAGGAAAAC
CGCTTTCTCA ATATCGGGGT ACTGATTCCT GCCCATAACG AAGAAAATGG AATTGCCCAG
GCCGTTACCG ATGTCCTTGC CTCCAATTAT CCGACCGAGA AGATCACCAT CTTCGTTGTT
GCCGACAATT GCACTGACCG CACCGCCGAA AAAGCCCGTC AAGCTGGTGC ACTTGTTTTC
GAGCGTTTCG ACGAGGTCAG CAGGGGAAAA GGCCAGGCTC TCGACTGGTT CCTGAAAAAC
TGCAAAGAGA GTTATCGCCA TACCGATGCC ATCACCGTTA TCGACGCCGA TGTTTCTGCC
GACAGCAATT ACCTTCGTGA AATCAGCGCA TCTCTCAGCC AGCCCGGCAT TCAGGTCATC
CAGGGATACA ATGGTGTCGG CAACCCGGAG GCAGGATGGC GACCAGCCTT GATTGATGCG
GCATTTAACG TCTTCAACCA TCTGCGCATG GCCGGATCGG TAAAATTATC GGGAACTGCC
GGACTGAAAG GCATTGGCAT GGCGTTCCGT ACCGAACTGC TTGCACGATA CGGATGGCCC
TGCCACTCGA TTGTTGAAGA TATGGAGTTC ACCTTTCTCC TGCTTGAAGA TGGTATCAGC
GTGCACTACA ACCCTGATGC CATTGTGCGC AGCGAGATGG TCACCGCTGG CAAAAATGCC
TCAACCCAGA GAAGCCGCTG GGAGGGCGGA CGATTCATGC TTGTACGGAA GATGAGCGCT
CCCCTGTTCA GACTTTTTGC CACAACAAAG GATCGTCGCT ACCTCTTTGC TCTTGCCGAA
CTCACCGTTC CGCCGCTCTC ACTGCTGGTC ATCCTCTTCA GCCTTGCCAC GGCAGGCGCC
TTTCTGCTGC TCAAGGGTGG CTGGCTCCTG CTCGCCCTCT CCTTCTGGCT GATCCTGCTC
TTCTACGTTG CCTCAGGGCA GATCCAGCGC CATGCGCCAC TCTCAACCTG GTTCTATCTT
GCGGCCGCGC CAATCTATAT CCTGTGGAAA ATACCGCTCT ACGCAGCAAT GCTGCTCAAG
AAAGGCAGCT CGGAATGGGT CAGGACAGCA AGAGAGTCGG AACAGAAGAA GAGCTGA
|
|---|
| Protein sequence | MIIAELILKG MLVVLALPAA YLLLSTVAAY FFKKESSQEN RFLNIGVLIP AHNEENGIAQ
AVTDVLASNY PTEKITIFVV ADNCTDRTAE KARQAGALVF ERFDEVSRGK GQALDWFLKN
CKESYRHTDA ITVIDADVSA DSNYLREISA SLSQPGIQVI QGYNGVGNPE AGWRPALIDA
AFNVFNHLRM AGSVKLSGTA GLKGIGMAFR TELLARYGWP CHSIVEDMEF TFLLLEDGIS
VHYNPDAIVR SEMVTAGKNA STQRSRWEGG RFMLVRKMSA PLFRLFATTK DRRYLFALAE
LTVPPLSLLV ILFSLATAGA FLLLKGGWLL LALSFWLILL FYVASGQIQR HAPLSTWFYL
AAAPIYILWK IPLYAAMLLK KGSSEWVRTA RESEQKKS
|
|---|
| |