Gene Ppha_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1693 
Symbol 
ID6463068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp1807810 
End bp1808391 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content42% 
IMG OID642727909 
Producthypothetical protein 
Protein accessionYP_002018546 
Protein GI194336752 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0984766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA TTTTATCGCA TAACGACTCG CTTGAATTTT TGGTACAAGA GCTTAAAACT 
GCGAGACTGG AAAAAAATCT TTCTATAGAC GATGTGAGCC GGTTGACCAA CATCAAAAAA 
AATTACCTTG AAAATATCGA AAATGGCAAT TTCAGTTTTC TCCCAAAAAG CTACGTCTTT 
GCTTGTATCA AATCATACAT GAAGGAGATC GGACTTGAGG GCTTCGAAGC GCTTGAGCAA 
TGCAAAAAGG ATCTCCAATT GCACAAACAA CTCAACAAGG AAGAGATTGC AAAATCAGGT 
TCCGAACTTT GCGAAACGAA ACCGCAAGAG CAAATAAACC GCAACAACTC GCAGCCAGTA 
AAGTCCATAC TGACTCTGAG CATCGGTATC TTGGTGGGGG TTCTTACAGG CGTCGGATTA 
AGTTACAGAA ACCAGAGTGT GGAAGCGCCG GTTCATCGTC TGCCTGCTAC AACTGCAAGG 
CCATCAGTCA ACCCGGTTGA TACAAATGAC AGAATAAAGC AGCGTTCTGA TTCCACAGCA 
AAAATACAAA GAAAAAAAAG TTTACACGCC CTCATCCCCT GA
 
Protein sequence
MKDILSHNDS LEFLVQELKT ARLEKNLSID DVSRLTNIKK NYLENIENGN FSFLPKSYVF 
ACIKSYMKEI GLEGFEALEQ CKKDLQLHKQ LNKEEIAKSG SELCETKPQE QINRNNSQPV 
KSILTLSIGI LVGVLTGVGL SYRNQSVEAP VHRLPATTAR PSVNPVDTND RIKQRSDSTA 
KIQRKKSLHA LIP