| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1640 |
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| Symbol | |
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| ID | 6463190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1727620 |
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| End bp | 1730283 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727856 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_002018494 |
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| Protein GI | 194336700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAGAA ACATTGCTGA TTACGGGCTG ATCGGGGATC TCCATTCTGT AGCCCTCGTC
TCAAAAGATG GCTCCATCGA CTACTGTTCC CTTCCATGGC TCGACTCCCC GACCATCTTC
GCATCACTCC TTGATGATGA GCAGGGAGGC TTCTTCAGCC TCCAGCCCTC GGAACCCTTC
AGCTCTGAAC AGCAATACCT TGCCAACACC AATATTCTCT CTTGCAAATT CCGAACCAGA
AGTGCCGAAG CGCTGCTCCA GGACTTTATG ACGGTGGAAA ATGGTGTTCA CATAAAAAAA
ACAACCCATC GTATCCATCG CTGCCTGAAG GTCACTCAGA ACAGCATGAG CTTTACACTC
ACCCTGAAAC CCCGCCCGGA TTACGCAAAA ACAATACCAT CCATTACAGA AGAGAGGAAC
AACCATTTTA CGGTCAGATA TGGAATCCAT ACCCTGACAC TATCCATTGC CGGCGGTCAT
GTTCTTCCTC TCCACAATGC AGCAGGAAAA CTCACACTGG CCTTGCAACT TGACGCTGGC
GAGGAGGCAC ACATCGATCT GCTCTATGGA AATCAGGCAA ACAGTGATCC CCTGCACTGT
CCTTTTGAAG AAAACAAGAT CTTCTGGCAG GATTGGGCAC TCCTCTGCCT TGGAGAACGG
TGCGCCTATC TCGGAGAGTT CAGTTCAATG ATCAACCGCT CTCTGCTTCT GCTCAAACTG
CTCACCTTTC AGCCGACCGG TGCCATTGCT GCAGCAGCAA CAACCTCCCT TCCGGAAACC
CTTGGAGGAG AACGGAACTG GGATTACCGC TTCAGTTGGC TGAGAGATGC CGCATTTACC
CTCAAAGCAC TCTTCGCCCT CGGTCACGTC AACGAAGCAG ACAACTATCT CCGCTGGGTT
CATGCCACTT ACCGCAAATA CGGAAGCCGT AATCTCCAAA TCATGTACAC CCTGCATGGC
AATGACCGCC TCACAGAACA AGAGCTCGGC CATCTGAAAG GGTACCGCAA TTCCCGCCCG
GTAAGAATCG GCAACGACGC ACATCGGCAA AACCAATGGG ACATTTACGG TGAAGTGATG
GATTCAGCCC TGCGACTTTC CGATTATGCA GGAAAAATTG ATGAGGAACT CTGGCCGTTT
TTCAGGGAAA TCTGTACACT TGCCATTGAA AACTGGCAAA AACCTGATGA CGGCATCTGG
GAAGTACGCA ATGGGCCACA TCATTTCGTC TACTCAAAAG TCATGTGCTG GGTTGCCCTC
GACCGCGGAA TCACCATTGC CCGCCGTTTC GGCTTTGACG CACCCCTCAG TCGCTGGCTG
CAAGAGCGCG ACCGCATCAA AGAAGATATT CTGGCAAAAG GATTCGATCA CACAGTAAAC
AGCTTTGTCC AGAAATACGG TTCTTCTGAA CTTGACGCAA GCCTTCTGCT GCTGCCGATT
GTTGGCTTCC TTCCCGCATC AGATGCAAGA GTGCAGGGAA CCATCAACGC CTGCAAAGAG
AGGCTGATGC ACCAGGGTTT TCTACTCCGC TACAAGGCAG AAGACGGCCT GAAAGGAGAG
GAGGGCGGAT TTATACTCTG TAATTTCTGG CTTGTTGAGT GTCTGGCACT GTCAGGAAAA
ACCAGCGAAG CCCTGCAGTT ACTCCATGAA ACCGTGAGCG CATCGAACCA TCTCGGCCTC
TTTTCCGAGG AATTTGAGAG CACCAGGCAT GAAATGCTCG GCAATTTCCC CCAGGCGTTC
AGTCATATCG GCTATATCAA TGCGGTTGCG GCAATTCTGG CGGCAGAGAA GCATCTCCAT
GAGGCAAAAA AAGAGAGCGC CCCTGGAAAA AAACAAAAAA AAATCATCCC CCTCCAGGTT
ACCCTGAACC CCCAACAGTC CGATCAACCT GAAGCAACCA TCACTCTCGG TGCTGAGTTA
AAAAAGAGAC TTGGCCGACT GCAGGGTGCA TTTTTCAATG CACAACGGGG AGTGGTCAAT
TACAACGCAC TCAAACAATC CGAAGAGTTC AGCCACTACC TGCGACTGGC CGGGTCACTC
AACAGCTTCA AACTCGAAAT GCTCCGGAAC GACGAAGAAA AAAAAGCTTT CTGGATCAAC
ATCTACAACG TTCTCATTAT TCACGGTGTC ATTGAATTCG ATATTCAGGG CTCAGTATTT
GAAATCCCAA ATTTTTTTGG CCGGATCGGA TACACAATCG GCGGACTCTT TTTTACTCCT
GATGATATTG AACATGGCAT ACTCCGCAGC AATCGACCAC ACACGCTCTT TCCCTTCAAG
CCGTTTTCAC CTCTTGATGA ACGCCGCCAC CTGATTGTTG CATCATTCGA TTACCGTATC
CATTTCGCGC TTTTCTGTTC ATCCTCCTCC TGCCCTCCCA TAGAGTTCTA CGACGCAGCG
CTCATTAACC GACAGCTTGA GACAGCCACA AAAAGTTTTA TCAACCGTGG CGGAATAGAG
ATTGAGCACG AAACCAACAC CCTCTGGATG TCGCTGATCT TTGAATGGTA CCCTGAAGAT
TTCGGCAACA GTTCACGCGA AACAATCCTC TCACTGTTAC CATACATGGA TGCAGAAAAA
AAAACCTGGA TAGAACAACA CATTGACACA CTCTACCTTC GCCACCTGCC CTATAACTGG
AATATGAACA CGATCCTGCA ATAG
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| Protein sequence | MYRNIADYGL IGDLHSVALV SKDGSIDYCS LPWLDSPTIF ASLLDDEQGG FFSLQPSEPF
SSEQQYLANT NILSCKFRTR SAEALLQDFM TVENGVHIKK TTHRIHRCLK VTQNSMSFTL
TLKPRPDYAK TIPSITEERN NHFTVRYGIH TLTLSIAGGH VLPLHNAAGK LTLALQLDAG
EEAHIDLLYG NQANSDPLHC PFEENKIFWQ DWALLCLGER CAYLGEFSSM INRSLLLLKL
LTFQPTGAIA AAATTSLPET LGGERNWDYR FSWLRDAAFT LKALFALGHV NEADNYLRWV
HATYRKYGSR NLQIMYTLHG NDRLTEQELG HLKGYRNSRP VRIGNDAHRQ NQWDIYGEVM
DSALRLSDYA GKIDEELWPF FREICTLAIE NWQKPDDGIW EVRNGPHHFV YSKVMCWVAL
DRGITIARRF GFDAPLSRWL QERDRIKEDI LAKGFDHTVN SFVQKYGSSE LDASLLLLPI
VGFLPASDAR VQGTINACKE RLMHQGFLLR YKAEDGLKGE EGGFILCNFW LVECLALSGK
TSEALQLLHE TVSASNHLGL FSEEFESTRH EMLGNFPQAF SHIGYINAVA AILAAEKHLH
EAKKESAPGK KQKKIIPLQV TLNPQQSDQP EATITLGAEL KKRLGRLQGA FFNAQRGVVN
YNALKQSEEF SHYLRLAGSL NSFKLEMLRN DEEKKAFWIN IYNVLIIHGV IEFDIQGSVF
EIPNFFGRIG YTIGGLFFTP DDIEHGILRS NRPHTLFPFK PFSPLDERRH LIVASFDYRI
HFALFCSSSS CPPIEFYDAA LINRQLETAT KSFINRGGIE IEHETNTLWM SLIFEWYPED
FGNSSRETIL SLLPYMDAEK KTWIEQHIDT LYLRHLPYNW NMNTILQ
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