| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1558 |
|---|
| Symbol | |
|---|
| ID | 6463374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1646591 |
|---|
| End bp | 1646935 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642727784 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002018424 |
|---|
| Protein GI | 194336630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTT CTGAAGAAAA AGCGCCAATG CCTTTGCCGG TTAAACGCGC TGTCATGAAA
TTTGGCCGGG ATTTGTCGCT GGCGAGGCGT CGTCGCCGGT TTTCGCAGGA GTCGATGGCA
GAGCGGATAG GTATTTCGGT CTCCAGTTTG AGGCGGCTGG AAAAGGGCGA TCCAGGTTTG
AGCTGGGGAA CCATTGCTCG TGCCATGTAT GTGCTTGGTG AAATCGAGAA GCTTAACCAA
CTGCTCGATA CGGCAAAAGA TGATATCGGA CTTGTTTTGA TGGATGAGCA GTTGCCCCGG
CGTATCCGCT CCCGAAAGCC TTCAGCGGAG TCCGGTGCGC TATGA
|
|---|
| Protein sequence | MIVSEEKAPM PLPVKRAVMK FGRDLSLARR RRRFSQESMA ERIGISVSSL RRLEKGDPGL
SWGTIARAMY VLGEIEKLNQ LLDTAKDDIG LVLMDEQLPR RIRSRKPSAE SGAL
|
|---|
| |