| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1554 |
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| Symbol | |
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| ID | 6463379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1643842 |
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| End bp | 1644219 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642727780 |
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| Product | PilT protein domain protein |
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| Protein accession | YP_002018420 |
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| Protein GI | 194336626 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.19075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGGGA ATAAATATCT TCTTGATACC AATTTTATAC TTGCTCTCTT CAAGTCAAAT
CCGATAGTAA TAGAGGAACT ATTCTCCCGA CAGGTTTACT CTTCCGAGTG TTTTTACAGT
GTTGTGACGC GAATGGAATT ATTGGGATAT CCAGGGATTA CCGATGGTGA AGAGTCGTTT
ATCAGGGAGA AACTTGACCA TTTTACCCAC TGCACTCTGA CCAGTGAGAT TGAAAACAGG
GTTATTGAGT TACGCAGAAA GCGTAAAATT AAATTGCCAG ATGCCATTAT TGCAGCAACG
GCACTCTCAT TGAAGCTTGA GTTATTGACA TTGGACAAGC ATCTTTTATC TGTTGTTACG
GCATCAAGAG AGCAATAG
|
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| Protein sequence | MSGNKYLLDT NFILALFKSN PIVIEELFSR QVYSSECFYS VVTRMELLGY PGITDGEESF
IREKLDHFTH CTLTSEIENR VIELRRKRKI KLPDAIIAAT ALSLKLELLT LDKHLLSVVT
ASREQ
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