| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1534 |
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| Symbol | |
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| ID | 6463434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1617249 |
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| End bp | 1618223 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727760 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_002018400 |
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| Protein GI | 194336606 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATATCA AGGATGTTGT TGCATCGGTA GCCGGTGAGA TTGAGATTTT TCAGCAGAGG
TACAAGGTGG TGCTGCAAGG CCAGAATACA CTGGTCGACA AGGTTACCCG TTATGTGCTC
AAGCAGCAGG GAAAACAGAT TCGCCCGGCT ATGGTTTTAC TTGCCGCTCA ACTGTGTGGA
GGGGTAAATG AGTCGAGCTA TCGTGCGGCT ATTATGGTTG AGTTGCTTCA TTCGGCAACA
CTGATCCATG ATGATGTGGT TGACGGCGCC GAGATGAGGC GTGGTCTGGC ATCAATCAAC
GCACTTTGGA AAAATAAGAT TTCAGTTCTT ATTGGTGATT ATCTGCTTTC CAAGGGTTTG
CTCTATTCTC TTGAATACAA GGATTATGGC TTTTTGCACA TGGTTTCCGA GGCGGTTCGC
CGGATGAGTG AGGGTGAAAT TTTTCAGATA CAGAAAACCC GCAGTCTTGA TATTTCCGAG
GCGGATTATC TCAGTGTCAT TGCCGATAAG ACAGCTTCGC TCATCTCTTC AGCCTGTGCA
ATGGGCGCTA TGAGCGCGAC CACTGATGAG GTGCGTATTG CTGCTCTGAA AAGTTATGGG
GAATATCTTG GTCTTGCATT CCAGATTCGT GATGATCTGC TTGATTATAC AGGGGATTCA
AAAAAAACCG GCAAGCAAAT GGGTATTGAT ATCAAGGACA AGAAAATAAC GCTCCCTCTT
ATTTATGCGC TTCTTCATGC CCCGGTTGCA GAGCAGAAGA TGATTCGCTC TATTTTGAAA
AGTTCACGTA AAAGAGCGGT GAAGAGCGGA GAGGTTATTG CGTTTGTTAC AGGCAAGGGT
GGGCTTGTCT ATGCTGCTGA AGTTGCAGAA GGATTTGCTG CAAAAGCGGT GGCTTCTATC
AGCTCTTTTC CTGAAAGCGC AGCAAAAACC TCGCTGCTGC GCCTCGTTGA TTTTGTCATG
AAAAGAGAGT ATTAG
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| Protein sequence | MNIKDVVASV AGEIEIFQQR YKVVLQGQNT LVDKVTRYVL KQQGKQIRPA MVLLAAQLCG
GVNESSYRAA IMVELLHSAT LIHDDVVDGA EMRRGLASIN ALWKNKISVL IGDYLLSKGL
LYSLEYKDYG FLHMVSEAVR RMSEGEIFQI QKTRSLDISE ADYLSVIADK TASLISSACA
MGAMSATTDE VRIAALKSYG EYLGLAFQIR DDLLDYTGDS KKTGKQMGID IKDKKITLPL
IYALLHAPVA EQKMIRSILK SSRKRAVKSG EVIAFVTGKG GLVYAAEVAE GFAAKAVASI
SSFPESAAKT SLLRLVDFVM KREY
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