Gene Ppha_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1486 
Symbol 
ID6463511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1566078 
End bp1567133 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content45% 
IMG OID642727713 
Producthypothetical protein 
Protein accessionYP_002018353 
Protein GI194336559 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA AAACCGGCAA TAACCTGGCT GGTTATATCG GACTTGCTCT TGGACTTGTT 
CTTATTGTGT TTCAGTTCCG CCAAATTGAT TTTGCGGGAG TGGTTGGACG GATCTCGTCA
ATTGGCTTTT CCTCTGTCTC TATTCTTCTT CCTTTTCTGG CGCTTCACCT TCTGGAAACG
TTTGCATGGA TAAAGGTTTT TCCTCCAGGT ATAACGGCAA TACCTTTTTT CAAACTTCTT
AAAATACAGT TGATAACCGA AACCATATCC ATGACGCTTC CTGCGGGTAT GGCTATCGGT
GAACCTCTTC GCCCTTATCT TTGCAGTCGC TTTATTGGAA TTCCACTTCC GGCAGGCGTG
GCAAGTGTCG CTGTGCGCAA ACTCATGCTT GGTGTGGCCC AGGGGATCTA CACTATTATT
GGCGCCATAG CTGGCTTTTC CCTGTTACAG ACCATTTCCA TTCCGATGAT TCCGGCAGGA
GTTCTTGGTT ACATTATGGT CGGAGCCGGT GTGGCAGTTT TTTCCCTCTT TTTTGTTTTT
TTGCTCCTGC TGCTCAATGG AAACGCAGCG CAAAGTGTAC ACAGACTTCT GATGTTTGTA
CCATTCAAGC GGGTAAAAAA ATGGCTGCTT GACAGGGAGA GTGGATTTCT TGATACCGAT
GCTGAGTTGA AGAGTTTCGA TACCCCTTTT GCAGGACGGC TGATTCTTGT ATTGCTCATC
TATATTATCG CCTGGTTCAT GCTTGCGATC GAGAGTTATA TTATCCTTCG CTTGCTTGGT
GTTGATATCT CATTTTTACA GGTGCTCTCC ATGGATACTG CCATTACCAT GCTTCGGGCT
TTCTTTTTTT TCATTCCATC AGGACTCGGT ATACAGGAAT TAGGTTATCG TGTTTTTTTC
CAGGCACTTG GATTGTATAA TGTTCAGGAT TATGGCGCTT TTGTGCTTTT AAGACGTTTT
AAGGAGCTCC TTTGGTACAC CTTTGGGTAC GCAATCATGT TTTTATCAGG GGTTCATCTA
CGAGATGCAG AGGGAGTTAG TCGGGGAGAT TCATGA
 
Protein sequence
MTKKTGNNLA GYIGLALGLV LIVFQFRQID FAGVVGRISS IGFSSVSILL PFLALHLLET 
FAWIKVFPPG ITAIPFFKLL KIQLITETIS MTLPAGMAIG EPLRPYLCSR FIGIPLPAGV
ASVAVRKLML GVAQGIYTII GAIAGFSLLQ TISIPMIPAG VLGYIMVGAG VAVFSLFFVF
LLLLLNGNAA QSVHRLLMFV PFKRVKKWLL DRESGFLDTD AELKSFDTPF AGRLILVLLI
YIIAWFMLAI ESYIILRLLG VDISFLQVLS MDTAITMLRA FFFFIPSGLG IQELGYRVFF
QALGLYNVQD YGAFVLLRRF KELLWYTFGY AIMFLSGVHL RDAEGVSRGD S