| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1455 |
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| Symbol | |
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| ID | 6463551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1526746 |
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| End bp | 1528134 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727685 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002018326 |
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| Protein GI | 194336532 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.551479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAA ATAATCGCAT CGAATACAAG CGCGAGCTGA CTGACGGACT GGAGAAAGAG
GTCATCGCAT TTCTGAACTA TCATGATGGT GGCATTATCT ATATCGGTAT TGACAAGCAT
GGAGCGATCT ACGGCGTTTC GGAGTGCGAC GCTCTGCAGC TTGTCATCAA GGATCGCCTC
AAAAATAATA TTCAGCCCTC ATGCCTTGGT TTGTTCGATG TCATTCACGA AACCCGTGAA
GGCAAAGATA TTATTAAACT CATCGTTGCC AGTGGTACCG AAAAGCCCTA TTACCTGCGC
AGGTTCGGCA TGTCGGAAAA AGGATGTTTC ATTCGCATTG GCAGCGCCAG TGAGCCCATG
ACGCAGCACA TGATTGAAGA GTTGTTTGCC CGGCGTACGC GTAATTCGAT CGCCCGTATC
CGTTCTTTGC GGCAGGATCT CACCTTTGAA CAGCTTAAAA TCTACTATCA GGAGGCAGGA
CTTACACTTG GCGACAAATT CGCCGCGAAT CTCGAACTGC TCACCGAGGA TGGAGTTTAC
AATTATGCCG GTTACCTGTT GGCAGACCAG AACGGCAATT CGGTGCAGGT GGCAAAATAC
GCAGGCACTG ACAGGGTTGA TCTGCTTGAA AGCAAGGATT ACGGCTTCTG TTGCCTGGTT
AAAACCTGCA AGCAGATACT CGATCGTCTG GAGGGAGTCG AGAACCGAGT TATCAATAAA
ATAACTCCCC GTGAGCGTAT CAGCCGAAGC CTGTGGGGAA AGGTTGCCCT TCGTGAAGCC
GTTATCAACG CCATCATTCA CAACGACTAC AGTACCGAAC TGGTGCCAAA GTTTGAAATT
TTTGCTGATC GACTGGAAAT TACCTCGGCA GGTACCGTTC ATCCCGGATC GGAGCAGGAT
GATTTTTTTG CCGGTTACTC CATGCCTCGC AACAAAACCC TGATGCGGGT CTTCAAGGAT
CTTGCTATGG TGGAATATCT CGGCTCTGGA ATGCCCCGGA TTCTGAAAGC TTACCCGCGT
GAAGCCTACA CATTCTCCAC TCATTTCATA CGGACGACCT TTCCCGTTTC CAGGGAAGCT
CTTGCGCTGG AAGAAGAGGT ACTGAAAGCC GAAGCAAAAA CCTCGGGGGC CCAGTCAAGG
GCCCAGTCAA GGGCCCAGTC GGTAGCTGTT CTGCTGGCAT TGACCGATGC AACCCGCTCT
GCCATGGAGC TTATCGAAAT ACTTGGTCTT GAGACCAAAA CAGGGGCATT CAAGCGAGCC
ATAAAGGAGT TGCTCGAACA GGAGCTTATT GCCTATACTC TCCCTGAAAA GCCCGGCAGC
CGCCTGCAAA AGTACCGGAT TACCGAAATA GGGTCAAGCT ATGTAAAGAA TATTCAAAAA
GATCAATAA
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| Protein sequence | MTENNRIEYK RELTDGLEKE VIAFLNYHDG GIIYIGIDKH GAIYGVSECD ALQLVIKDRL
KNNIQPSCLG LFDVIHETRE GKDIIKLIVA SGTEKPYYLR RFGMSEKGCF IRIGSASEPM
TQHMIEELFA RRTRNSIARI RSLRQDLTFE QLKIYYQEAG LTLGDKFAAN LELLTEDGVY
NYAGYLLADQ NGNSVQVAKY AGTDRVDLLE SKDYGFCCLV KTCKQILDRL EGVENRVINK
ITPRERISRS LWGKVALREA VINAIIHNDY STELVPKFEI FADRLEITSA GTVHPGSEQD
DFFAGYSMPR NKTLMRVFKD LAMVEYLGSG MPRILKAYPR EAYTFSTHFI RTTFPVSREA
LALEEEVLKA EAKTSGAQSR AQSRAQSVAV LLALTDATRS AMELIEILGL ETKTGAFKRA
IKELLEQELI AYTLPEKPGS RLQKYRITEI GSSYVKNIQK DQ
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