| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1442 |
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| Symbol | |
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| ID | 6463570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1517515 |
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| End bp | 1518054 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727674 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002018315 |
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| Protein GI | 194336521 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.174076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACCT GGAACGCCAA TCGTCCTCAC GGGTTTGGTG TGCTGAATCC CGATACCTTC
GCGCCGTATC CTAAAAACCC GGTGATCGGT GCATTTTTCA GGGAGATAGA CCGTGCAGAC
GAACTGGGTT CTGGTTTGCG CAAGATGATG ATGTACGGAA AAAAGTACGG CGGAGCGGAC
CCTCAGCTCA TCGAAGGTGA CGTTTTTCGC ATGATTATCA GTGTGCCGGA GTTTGGAAAG
AAACCTTTAA ACACCCTTGG ACGTGAGCCA GCGACATTTT CTTCAGGGCC AGAGTCGATT
TTTAAAAGAG TCATCAGGGA GTTGCTCATC GGCTCTCGAT CAAAATCCGA ATTAGCTACT
GCGCTTGGCC AAAAGTCGGT ATCGGGAAAA CTGAATGAAC GAATCCGTGA AATGCTTGCT
GACGGCTTGA TACCTGCCAT CCGCGTGGCG AAACTGCTTA TGAGTACCCC GTTGTCGAAT
TTCGTTAAAT CCAAGTGCTT CAAGGAATCC AACAATCTCG CGAGGTTTGA GAACAGGTAA
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| Protein sequence | MITWNANRPH GFGVLNPDTF APYPKNPVIG AFFREIDRAD ELGSGLRKMM MYGKKYGGAD
PQLIEGDVFR MIISVPEFGK KPLNTLGREP ATFSSGPESI FKRVIRELLI GSRSKSELAT
ALGQKSVSGK LNERIREMLA DGLIPAIRVA KLLMSTPLSN FVKSKCFKES NNLARFENR
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