12 homologs were found in PanDaTox collection
for query gene Ppha_1442 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_1442  putative transcriptional regulator  100 
 
 
179 aa  363  1e-100  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.174076  n/a   
 
 
-
 
NC_011060  Ppha_1448  putative transcriptional regulator  74.59 
 
 
499 aa  266  1e-70  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1151  putative transcriptional regulator  75.46 
 
 
163 aa  232  2.0000000000000002e-60  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.796033  n/a   
 
 
-
 
NC_008639  Cpha266_1148  hypothetical protein  83.12 
 
 
113 aa  121  5e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0507  divergent AAA ATPase  57.89 
 
 
483 aa  98.2  6e-20  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0081  putative transcriptional regulator  56 
 
 
485 aa  97.1  1e-19  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0499  hypothetical protein  33.52 
 
 
314 aa  86.3  2e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.12041 
 
 
-
 
NC_013721  HMPREF0424_0734  hypothetical protein  33.15 
 
 
322 aa  79  0.00000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00313074 
 
 
-
 
NC_013204  Elen_2841  putative transcriptional regulator  34.51 
 
 
458 aa  67  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1518  putative transcriptional regulator  34.25 
 
 
498 aa  51.2  0.000008  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1428  putative transcriptional regulator  27.63 
 
 
620 aa  42.4  0.003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00334875  n/a   
 
 
-
 
NC_009135  MmarC5_0620  putative transcriptional regulator  28.05 
 
 
469 aa  41.6  0.006  Methanococcus maripaludis C5  Archaea  hitchhiker  0.00572222  n/a   
 
 
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