Gene Ppha_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1401 
Symbol 
ID6463615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1463520 
End bp1463876 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content45% 
IMG OID642727640 
Producthypothetical protein 
Protein accessionYP_002018281 
Protein GI194336487 
COG category[S] Function unknown 
COG ID[COG3472] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.174076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACACCG GGGGGGATAT CCATCATATT TTTCCCTGGC AGTATTTGAA AGAGAATGGT 
TTCAGCCAGA GCCAGTACAA TCAGGTGGAG AACTATGTCT ATGTTCAGCA GGAGATTAAC
ATCAAGGTAG GGAAGCGCTC TCCGGCAGAT TATATCGGTC AAATCCGTGA GCAATGTCAA
AGCGGGAAGC TCGCCTTTGG CGGTATTGAT ACTCTTCCGG ATTTCGAAGC AAACCTTGAG
GCTAACTGCA TTCCCGGTAC GATCTATGAG ATGACGTTAA AAGATTACGA TGAATTTTTG
GGGGTTCGCC GAATATTGAT GGCTCGGAAA ATCAAATGCT TTTATCAAAG CCTATAA
 
Protein sequence
MNTGGDIHHI FPWQYLKENG FSQSQYNQVE NYVYVQQEIN IKVGKRSPAD YIGQIREQCQ 
SGKLAFGGID TLPDFEANLE ANCIPGTIYE MTLKDYDEFL GVRRILMARK IKCFYQSL