Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1316 |
Symbol | |
ID | 6461192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1382484 |
End bp | 1383368 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642727557 |
Product | lipoyl synthase |
Protein accession | YP_002018198 |
Protein GI | 194336404 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACATG TACCTGGAAA AAAACCGGAA TGGTTGAAAA TAAGGTTATC CTCCGGAGCA TCTTTTGCTT CAACAAAACG ACTGCTTGAC CGTCACAGTC TGCATACCGT CTGTCGTTCG GCAATGTGCC CCAACTTGCA GGAGTGCTGG TCACGCGGTA CAGCAACCTT CCTCCTTCTC GGAACAGTCT GCACACGAAA CTGCAGATTC TGTGCCGTTG GCAAGGCTTC AAACCCGCCG GCACCTGATC CCCGTGAACC TGAAAAAATT GCCCTTGCTG TTCACTCCAT GCAACTGAAG CACACCGTCC TGACCAGTGT CACCCGTGAC GATTTGCCTG ACGGAGGTGC AGAATACTGG GTGGCAACGA TTCGTGCCAT CCGTACCCTG AACCCGTTTG TGACCATCGA ATGCCTTATT CCTGATTTCG AAGGTAATGA ACGCGCTATG GATCTCGTCA TGGCGGAGCT TCCCGAAATT CTGAACCACA ATATTGAAAC CGTACCCTCC CTTTATACGA AGGTTCGCCC GCAGGCAAAC TACGCAACAT CACTTCGTCT GTTGCAACGG GCAAAAGAGA TGCACGGTCT TACCACAAAA TCAGGAATGA TGGTGGGTAT GGGTGAAACT GCAGAGGAGG TGGCGATCTC GCTTGGTGAC CTCCTCCTTC ATGGGTGCGA CATGGTAACG ATCGGCCAGT ATTTACAGCC CTCAGCCCTG CATCTGCCGG TCGAACGCTA CATCACGCCG GAAGAGTTTG AGCAGTACCG GAGCTTTGCC GAAGGAGCCG GCTTCCGGCA CGTCCAATCC GGCCCTTTCG TCCGAAGCTC CTATCATGCG GAAGCATTGA CCAAGAAAAC AGAAACAGTT TGTTCACCCA TTTAA
|
Protein sequence | MEHVPGKKPE WLKIRLSSGA SFASTKRLLD RHSLHTVCRS AMCPNLQECW SRGTATFLLL GTVCTRNCRF CAVGKASNPP APDPREPEKI ALAVHSMQLK HTVLTSVTRD DLPDGGAEYW VATIRAIRTL NPFVTIECLI PDFEGNERAM DLVMAELPEI LNHNIETVPS LYTKVRPQAN YATSLRLLQR AKEMHGLTTK SGMMVGMGET AEEVAISLGD LLLHGCDMVT IGQYLQPSAL HLPVERYITP EEFEQYRSFA EGAGFRHVQS GPFVRSSYHA EALTKKTETV CSPI
|
| |