| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1298 |
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| Symbol | |
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| ID | 6461870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1357091 |
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| End bp | 1358419 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727539 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002018180 |
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| Protein GI | 194336386 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GCCAAGCCAC CGTGACGGAT ATTTCTGAAT TGCGATGTCG GGCAGAGGAT
CATCTTCGAA AAAGCCAGCC TGGTGAGCAG GGTTTTTCCC TGTCGCAGGG TGATATGCAT
CGGATGATCC ATGAGTTGTC GGTTCATCAG ATTGAACTTC AAATGCAGCA GGAGGAGCTG
CTTCAGTCGA AGGATGAGCT GGAAGATGCT CTTGCACGCT ATACCAGGCT TTACGATTTC
GCTCCTGTGG GCTATCTGAC GCTTGCTGTC GATGGCACCA TTCTTGATGC TAATCTTACG
GCAACAACGA TGTTTGGTGT GGATCGCTCC TTGTTGAAGG GCTCCTGTAT GGCGCTCTTT
GTCGCTCCTG AAGAGATGAG GGTTTTTAAA GCGCTGATGG AGAGGGTTTT CAGCCATCAG
GCGCAAGGCT CTTGTGATCT TACGCTTTGT TACGAGAGTC TCTCTGCGAC TTTGCGATGT
ACCGTGCATA TTGATGCTGT CATTCAGGAT GATGGCCAGT CATGCTGCAT GGCGCTTTCT
GATGTCACCC GCCAGAAGCG GATTGAGAGA GAGCATGCGG CGATTCAGAT AACTTTGGTT
CAGGCTCAGA AGATGGAGTC AATCGGGAGG CTTGCGGGTG GTGTTGCGCA TGATATGAAC
AATATGCTGC AGGTGCAGCT TGGTAATATC GAGTATTTAC TCTCAATGGG GGAGCTTTCG
GAGAGTGTGC GGCTGACCCT TTCCGATCTT CAGAATTCCG TCATGAGATC TGCAGGGATT
GTTCGTCAAC TGCTTGCCTT TGCCCGAAAG CAGATAATCC ATCCGAAGGT GCTCGATTTC
AATGCTGCGA TAACTACTAT TCTGAGAATG CTTGGACACA TTCTTGGTGA GCATATCAAG
CTGATCTTTG CTCCAGGAAC TCTTCTCTGG TCAGTGAAGA TAGATGCCGT GCAAATAGAT
CAGATAATGA CCAATCTTGC TCTCAATGCA AGGGATGCCA TCAAGGTGAA CGGTACCCTT
TTTATTGTGA CCCGCAATGT TGTTGTTGAA GCTGATTTCT GTCACGATCA TTCTGAACTG
ATTCCTGGCG ATTACGTCTT GCTTGAGGTC CGGGATGATG GCTTCGGGAT GGAGAAGGAG
GTTCTCGATT ATGTTTTTGA GCCCTATTTT ACCACCAAAT TCATGGGTGA TGGCGCGGGT
CTTGGGCTTG CAATGGTTTA TGGCATCGTA CAACAGAACC ATGGAGCGAT TTTTGCCTCC
AGCATAAAAG GCACAGGGAC GACATTCGCG ATCTATTTGC CCCGTGTCCC GGCTTGCCCG
CAAATCTGA
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| Protein sequence | MKKSQATVTD ISELRCRAED HLRKSQPGEQ GFSLSQGDMH RMIHELSVHQ IELQMQQEEL
LQSKDELEDA LARYTRLYDF APVGYLTLAV DGTILDANLT ATTMFGVDRS LLKGSCMALF
VAPEEMRVFK ALMERVFSHQ AQGSCDLTLC YESLSATLRC TVHIDAVIQD DGQSCCMALS
DVTRQKRIER EHAAIQITLV QAQKMESIGR LAGGVAHDMN NMLQVQLGNI EYLLSMGELS
ESVRLTLSDL QNSVMRSAGI VRQLLAFARK QIIHPKVLDF NAAITTILRM LGHILGEHIK
LIFAPGTLLW SVKIDAVQID QIMTNLALNA RDAIKVNGTL FIVTRNVVVE ADFCHDHSEL
IPGDYVLLEV RDDGFGMEKE VLDYVFEPYF TTKFMGDGAG LGLAMVYGIV QQNHGAIFAS
SIKGTGTTFA IYLPRVPACP QI
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