Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1257 |
Symbol | |
ID | 6463756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1317695 |
End bp | 1318669 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727498 |
Product | hypothetical protein |
Protein accession | YP_002018139 |
Protein GI | 194336345 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.591425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAACT CGAACGATCA CTATGACAGC CCATGGAAAG AGGCCATTGA GCATTACTTT TCGGAGTTTA TGGCCTTTTA TTTCCCGGAT GCCCATGCTG AAATAGATTG GTCACAGGAG CATATTTTTC TGGATCAAGA GTTGCGGGCA GTGGTGCAGG ATGCTGAGCT GGGGAGACGC TTTGTTGACC GACTTGTCAG GGTGACCGAA CGTTGTGGCA ATGAAAGCTG GATATACATC CACGTTGAAG TGCAGGGCAA AAAGCAGGTC GAATTTGCCG AACGGATGTT TGTGTACAAT TACCGGATTT TCGACCGATA CAAAAGACCT GTAGCAAGTT TGGCGGTGCT GGCCGATGAA CACAAGCTTT GGAAACCAAC CTCTTATGGT TTTTCTGTGC TGGGATGTCG CCATACGCTG GAGTTCCCGG TTGCCAAACT GACAGATTAT GAAGACAAAC TCGACGAGCT GCTGGCATCG GATAACGCTT TTGGATGGAT TACGGCGGCA CACATCCTGA CCAAAAAGAC CAGAACAGAG GATCAGGAAC GGTACAACGC AAAACTCCGT TTACTGCGGA TATTGTATGA CCGGCATTGG GATAAACAAC GGGTAATCAA CTTATTCAAT GTCATCGACT GGTTAATGCA ACTGCCGGAA TGGTTGAATA GCAAGGTCTG GCAAGAACTT GAAACAATTG AGGAGAGAGA AAAAGTGCAA TACATTACAA GCGTAGAACG TATTGGCATT GCCAAGGGAA TAGCCAAAGG CCGTGTTGAG GGCCGTGTTG AAGGCCGCGT CGAGGGCGAA TCAAGGTTAT TGAAAAGGCA GCTTGAGCGT CGCTTTGGCC CTTTGCCTGA GTGGGTATCA GTCCGATTAG GGAGCGCAAA AGAGGATGAG CTGGAAACAT GGAGTGAAGC CGTTCTCACA GCCCCGACTC TGGAAGCTGT TTTCGGAAAA ACTGACCCAT CGTAA
|
Protein sequence | MENSNDHYDS PWKEAIEHYF SEFMAFYFPD AHAEIDWSQE HIFLDQELRA VVQDAELGRR FVDRLVRVTE RCGNESWIYI HVEVQGKKQV EFAERMFVYN YRIFDRYKRP VASLAVLADE HKLWKPTSYG FSVLGCRHTL EFPVAKLTDY EDKLDELLAS DNAFGWITAA HILTKKTRTE DQERYNAKLR LLRILYDRHW DKQRVINLFN VIDWLMQLPE WLNSKVWQEL ETIEEREKVQ YITSVERIGI AKGIAKGRVE GRVEGRVEGE SRLLKRQLER RFGPLPEWVS VRLGSAKEDE LETWSEAVLT APTLEAVFGK TDPS
|
| |