Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1229 |
Symbol | |
ID | 6463372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1286524 |
End bp | 1286988 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642727477 |
Product | cyclase/dehydrase |
Protein accession | YP_002018118 |
Protein GI | 194336324 |
COG category | [S] Function unknown |
COG ID | [COG4276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGC ATACTGTTAC TTATGTTCAG CAAATTCCTC TCGATCTTGA TGCTGTATGG AATTTTTTTG CTTCTCCGGC CAGCCTTGCC CGGATAACAC CTCCGGAAAT GATGGTCAGG ATAACCCATG GCGACGGAAT GCAGCCGCTT TATGAAGGAA TGCTGATCAG TTATACGCTC TATCCTTTCA TGATGCTTCC GGTACGGTGG GAAACCGAGA TTACCAGGGT TGAGAGACCG TTTCTGTTTG AGGATCGCCA GAAATCGGGG CCTTATGAGA GCTGGCATCA CCTCCATCAG TTTCGTGCAA TACCGGGTGG TGTTGAAATG ACCGACAGAG TTGACTATGT CATGCCGATG GACTTTTTTG GCGATATTGT CAATACCCTG ATTGTGAGTC GACGGCTTGA GGAGGTTTTT GCTTACCGTA AAAAGAGGAT TGAAGAGATT TTAGGCCGCA TGTGA
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Protein sequence | MTLHTVTYVQ QIPLDLDAVW NFFASPASLA RITPPEMMVR ITHGDGMQPL YEGMLISYTL YPFMMLPVRW ETEITRVERP FLFEDRQKSG PYESWHHLHQ FRAIPGGVEM TDRVDYVMPM DFFGDIVNTL IVSRRLEEVF AYRKKRIEEI LGRM
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