| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1226 |
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| Symbol | |
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| ID | 6462120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1284148 |
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| End bp | 1284846 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642727474 |
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| Product | protein of unknown function DUF1016 |
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| Protein accession | YP_002018115 |
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| Protein GI | 194336321 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4804] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.275658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAGG TCAGAACAAC CGAATACGCA GAATTTCTTA TCGATATCAA GTCTCGTATT
CACCAGCGGC AGTATCAGGC TTTCCGGGCA GTGAATACGG AGCTGGTCGC GCTTTATTGG
GAAATTGGTG AGTCCATTGA GAGGAAACAA CAGAAACTTG GCTGGGGAAA AGCGGTAGTG
GAGACGCTTG CCCGTGATCT GCAGGCAGAA TTTCCCGGCA GAAACGGATT TTCTGCGCGC
AATTTGTGGA ATATGAGGGA TTTCTATCTT GCCTATGCAG AGCATTCAAA ACTGCAACCG
CTGGTTGCAG AAATCAGTTG GGCTAAAAAC CTTGTTATTT TCACCCGATG CAAAGATGAG
CTTGAACGAG AATTCTATCT TCGGGCGACG GCCAGGTTTG GCTGGACAAA GGCGGTACTT
CAGCACCAGG TTGACAACAA AAGCTACGAA AAATACCTGC TCAACCAGAC CAATTTTGAT
AAAACACTCT CTCCTGAACT GCAAGCTCAG GCTGTGCTTG CGGTCAAGGA TACCTACACT
TTCGACTTTC TGGAGCTGGC TGATGAACAC TCTGAGCGGG AACTGGAACA AGCATTGGTG
CAGAACCTTC GCCGTTTTCT CTCCGAAATG GGCGGCGCCT TTAATCAAGC CCGAAATCAG
GAAATTTTTG GATTTTTGAA CAGATTTGGA GCAAATTAA
|
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| Protein sequence | MSEVRTTEYA EFLIDIKSRI HQRQYQAFRA VNTELVALYW EIGESIERKQ QKLGWGKAVV
ETLARDLQAE FPGRNGFSAR NLWNMRDFYL AYAEHSKLQP LVAEISWAKN LVIFTRCKDE
LEREFYLRAT ARFGWTKAVL QHQVDNKSYE KYLLNQTNFD KTLSPELQAQ AVLAVKDTYT
FDFLELADEH SERELEQALV QNLRRFLSEM GGAFNQARNQ EIFGFLNRFG AN
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