| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1200 |
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| Symbol | |
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| ID | 6463584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1252377 |
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| End bp | 1253015 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642727448 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_002018089 |
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| Protein GI | 194336295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.162104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACACT CAGTATCAAC CCGTAAAGAA TTGACCATCC TGAAAATAGA GGAAGATGTT
TTCGATTTCC GTCATAAAGA GGCATTCAGG CAGGCAATTG ACGGAATGGT GAACAAGGAG
AACACCAAAA ACCTGATTAT CGATTTTTCT CAGGTAAAAG CCATTGATTC CTGCGGAATA
AGCTCAATGC TGCTTGCTCA TCAACTCTCG AATCAGTCAG AGGGATTGGC CATTTTTGTC
TCTCTCTGTA AACAGATCAA GGATCTTCTC AAATTGACCA ATCTCGACAA ACAACTCTAC
ATTTTTTCTT CCATAAATGA GGTTGTTACC CTGATTGAGC CCGCAATGAA AAGCAAGCGA
GGTGTGAGAG GAAAGTCACA GACTCCGGTA GATGAAATCA TCGATGAACT CCTGTGCGAT
GATCTTGATC TTATCGTCGA ACCAGAGATC CACGATGAAC ATCTCGACGA AAGCCTTGAC
GAACAGCTTG TAGAGCCCGA TGAAATGGCC ACTGAACCGG AACTCCCCAG CCCAAAGGCC
GAAAAAGAGA GTGGCTCAAA AAAAAGAGGA CGTCCCAAAA AACCGGAATC AGAAACGACA
TCGAAACAAA AAAAACAGAA AAAAGAGTCT GAGGCTTGA
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| Protein sequence | MKHSVSTRKE LTILKIEEDV FDFRHKEAFR QAIDGMVNKE NTKNLIIDFS QVKAIDSCGI
SSMLLAHQLS NQSEGLAIFV SLCKQIKDLL KLTNLDKQLY IFSSINEVVT LIEPAMKSKR
GVRGKSQTPV DEIIDELLCD DLDLIVEPEI HDEHLDESLD EQLVEPDEMA TEPELPSPKA
EKESGSKKRG RPKKPESETT SKQKKQKKES EA
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