| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1197 |
|---|
| Symbol | metG |
|---|
| ID | 6463090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 1247316 |
|---|
| End bp | 1249418 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642727444 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_002018086 |
|---|
| Protein GI | 194336292 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCGT TTACAAAAAC CCTTGTCACA ACAGCACTTC CATACGCCAA TGGTCCGGTT
CATCTTGGCC ACCTGGCGGG CGTCTATCTT CCTGCGGATC TCTATGTCCG CTATATGAGG
CTCAAGGGTG AGGATATCAT TCATATCGGT GGCTCGGATG AACATGGAGT GCCCATTACC
ATTACAGCCG AGAGAGAGGG TATTTCACCC AAGGATGTTG TTGATCGCTA TCACCGGATG
AACAGTGAGG CCTTCTCAAA ATGTGGTATC TCCTTTGATT ATTATGGCCG AACCACTTCT
GAGGTTCACC ACAAGACGGC ACAGGAGTTT TTTACTGACA TTGAAGAGAA GGGGATTTTT
ATACGAAAGA GCGAGAAGCT TTTTTTTGAC CGCAAGGCTG ACCGTTTTCT TTCGGATCGT
TATGTGACAG GAACATGCCC GATCTGCAAC AATACGGAGG CGAATGGCGA TCAGTGCGAA
CAGTGCGGCA CCCATTTAAG CCCGCTCGAA CTCATCAACC CGAAAAGCAA GCTCTCCGAT
GCGACTCCGG AACTTCGCGA GACCATGCAC TGGTATTTTC CGCTGGGACG GTTCCAGGAT
CAGCTTGAGA GCTATGTGCA TCAGCATGAG GATGACTGGC GACAGAATGT GCTCAATTAT
ACGCATACCT GGCTGAAGCA AGGCTTGAAA GATCGGGCAA TAACCCGTGA TCTTTCCTGG
GGGATCAAGG TTCCTTTGGA GAGCGAAGAA GCCGAGGGAA AAGTGCTCTA TGTCTGGTTT
GATGCCGTGC TGGGCTATAT CTCCTTTACC AGGGAATGGG CAGAAAAACT GGGGCAGAGT
GAGCGGTGGA AAGAGTACTG GCAGAACCCG GAGTGTCGCC TGCTTCATTT TATTGGCAAG
GATAATGTTG TGTTCCACAC GCTTATGCTT CCAGCAATCC TGATGGCCTG GAATGAAGGC
CGCCAAAGCG AATGCTACAA TCTTGCCGAC AATGTACCTG CTTCGGAATT CATGAATTTT
GAGGGAAGAA AATTTTCGAA GTCGAGAAAC TATGCTGTCT ATCTAGGCGA GTTCCTCGAG
AAATTTCCGG CCGATACCCT GCGTTACAGC ATTGCGATGA ACTATCCGGA AAACAAGGAT
ACCGATTTCA GTTGGCAGGA TTTTCAGAAC CGAACCAACG GTGAACTTGC CGATACTTTG
GGTAACTTCA TCAAGCGGTC GGTTGATTTT ACCAATGCCC GTTTTGATGG CGAGGTTCCT
TGGGACTACA GCGAAGACTT ACTTAATAAC GTATTACTTT GCGATCAGAT TGATGACATA
GCAAGGGCTT ATGACGGTTT TCATTTCCGG GAGGCGGTAT CATCAAGTAT GGACATTGCT
CGCAATGCGA ATCGTTTTCT TACTCAGAAT GAGCCTTGGA AGCTGATTAA AACTGATCCT
GATGCTGCGG CTCGTGTTAT GTCTATATCG CTTAATCTGT GTCATGCACT CTCAATTCTA
TTTTATCCTG TTATTCCGGA GACCTGCAAT CGCATACATG CCATGCTTGG TTTCGATGGC
ACGATCGACA GCCTCATAAA GCCAGGCGTT TCCCTCTGGG AGCAGGCGAA AAAGCCCGGG
TTGAACAAGG GTCATCGGCT TCTTGGAAAA TCTGAAATTC TCTTCACAAA AATCGAGGAT
GCCGACATCG CTCCTGAACT CAAAAAAATA GAATTACTGG TTGCTGAAGC TGAAAAACGT
GAGGCTGGAG CTGAACAGCA AAAGATGGAG TTCAAACCGC TCATCAGTTT TGACGACTTT
CTCAAGGTCG ACCTTCGGGT TGCAAGGGTC ATCACGGCTG AAAAGGTGAA AAAAGCCGCA
AAACTCCTGA AACTGCAACT CCAGGTTGGT TCTGCCACGA AGCAGGTACT TGCAGGGATT
GCCAAATATT ATACTCCGGA AGAGATGGTT GGCAAAAATG TGGTCATTGT GGCCAATCTT
GCCGATCGCA CCATTCGTGA TGACGTTTCA GAGGGCATGA TTCTTGCCGT AGAAGGCGCT
GATGGGAAGC TTTTTGTCAT AGAACCCGAA GGAGAGGAAA TAAATGGCAG ACAGATACAA
TAA
|
|---|
| Protein sequence | MHPFTKTLVT TALPYANGPV HLGHLAGVYL PADLYVRYMR LKGEDIIHIG GSDEHGVPIT
ITAEREGISP KDVVDRYHRM NSEAFSKCGI SFDYYGRTTS EVHHKTAQEF FTDIEEKGIF
IRKSEKLFFD RKADRFLSDR YVTGTCPICN NTEANGDQCE QCGTHLSPLE LINPKSKLSD
ATPELRETMH WYFPLGRFQD QLESYVHQHE DDWRQNVLNY THTWLKQGLK DRAITRDLSW
GIKVPLESEE AEGKVLYVWF DAVLGYISFT REWAEKLGQS ERWKEYWQNP ECRLLHFIGK
DNVVFHTLML PAILMAWNEG RQSECYNLAD NVPASEFMNF EGRKFSKSRN YAVYLGEFLE
KFPADTLRYS IAMNYPENKD TDFSWQDFQN RTNGELADTL GNFIKRSVDF TNARFDGEVP
WDYSEDLLNN VLLCDQIDDI ARAYDGFHFR EAVSSSMDIA RNANRFLTQN EPWKLIKTDP
DAAARVMSIS LNLCHALSIL FYPVIPETCN RIHAMLGFDG TIDSLIKPGV SLWEQAKKPG
LNKGHRLLGK SEILFTKIED ADIAPELKKI ELLVAEAEKR EAGAEQQKME FKPLISFDDF
LKVDLRVARV ITAEKVKKAA KLLKLQLQVG SATKQVLAGI AKYYTPEEMV GKNVVIVANL
ADRTIRDDVS EGMILAVEGA DGKLFVIEPE GEEINGRQIQ
|
|---|
| |