| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1186 |
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| Symbol | |
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| ID | 6463571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1238518 |
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| End bp | 1239546 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727434 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_002018076 |
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| Protein GI | 194336282 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.402884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAAAAA TACTCTGTTA CGTTTTTCTT TTTTTCTGTG CCGTATCATG GATATCCCAA
CCTGCGGCAG GAAATCCAAA AGCCGGAAAA AGCGTACTCT TTCTGTGGTG GAACGTTGAA
AATTTATTCG ATACGCGCAA TGACCCGATA ACCAACGACG ATGATTTTAC CCCGGAAGGA
AAGCTGCACT GGACAGAAAA AAAACTCATC CTGAAACAGA TGCGCATCCG CCACCTCCTT
TCAGCAGTGA AAGCACACCC CGACTACAAT GCATATCCTG ATCTTTTGGC TTTTGCAGAG
GTAGAAAACC GAGAGGTGTT CGAGAAAACA CTCTCCGGGA TTCCGGATAT CGGCTATAAA
ACCATTTATC ACAACTCTTC CGATCCAAGA GGTATCGATA TCGGACTCGC CTTCAATCCA
CAAACCGTAC AGGCAAAAGC ATCGAAAGCC TACAGCGTTG CGAGCGCAGA GAGGGCAACT
CGCAAAATCA TCGTTGCTGA ATTTTTAAGT GAGGGCCACC CCTTTCACCT CATTCTGAAC
CACTGGCCAT CACGCTCTTT CGACACCCAC TGGACTGAAC CCAAAAGAGT TGCAGCCGCC
AGCGTTGCCC GTCACATTCT CGATAGCCTG CTTCTCAGCA AACCAAAAGC GGATGTTATC
ATCATGGGAG ACTTTAACGA TGAACCAGGC AACCGATCCT TGAGAGAGGG GCTCGGTTCG
ACATTTGATG CCGCCAGGCT CAAAACAAAC GGTAAAAAAT TTCTTTACAA CTGCTGGAGC
GGCTATGAGG GGATCGGAAG TTACTCGTAC AAAAACCGTT GGCAACAGAT CGACCAGATT
CTTCTGAGTG CAGGAATGTT TGATGAGCTT GGACTTTATG CCCCACAAAA CGCATTCCGT
TGCTTCTCTT TTTTCCGGCT TCTCGATGCC ACTGGCAACA AGCCCTATGC AACATTTGAA
AAAAGAAAAT ATACCGGAGG CTACTCCGAC CACCTGCCAC TGCTCCTGAA GAGCCGTATT
ATGCCTTAA
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| Protein sequence | MRKILCYVFL FFCAVSWISQ PAAGNPKAGK SVLFLWWNVE NLFDTRNDPI TNDDDFTPEG
KLHWTEKKLI LKQMRIRHLL SAVKAHPDYN AYPDLLAFAE VENREVFEKT LSGIPDIGYK
TIYHNSSDPR GIDIGLAFNP QTVQAKASKA YSVASAERAT RKIIVAEFLS EGHPFHLILN
HWPSRSFDTH WTEPKRVAAA SVARHILDSL LLSKPKADVI IMGDFNDEPG NRSLREGLGS
TFDAARLKTN GKKFLYNCWS GYEGIGSYSY KNRWQQIDQI LLSAGMFDEL GLYAPQNAFR
CFSFFRLLDA TGNKPYATFE KRKYTGGYSD HLPLLLKSRI MP
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