Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1155 |
Symbol | |
ID | 6462986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1206089 |
End bp | 1206541 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642727403 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002018047 |
Protein GI | 194336253 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGTCAG ACATGAAAAA GATGAAAAAG AGTGCTCTTG ATCTTCTCGA TAATATATAC TCTCTTGCAT ACTGGATGAC GGGAAGCGAG GATGTATCAA GCGACCTGGT TTACTGTACT TACCTCTCTG CAAGTATGGA AAGCGAGGAA AGAGTTTTGC TCAAAAGCTT CCGTGAATGT TACGTAAACC GCTTTGGTCA ATACACTGAT TTCTGTACAG GTGAAAAGAG CGACCAGTGC CATCTGCAAC CTCTCGATTC ATTGATTCCT TGGGCAGCAG ATATGAAACT CTCCGTTCTG TTGAGCGAAA TATCTGGTCT GAAACATCTT CAGATAGCAG AGATTGTTGG AAAGCCAGTT GAAACCGTAA GACTGTGGCT GTTATGGGGA AGGAAAATCT TGTCTCTGGC AAATCAAAAT CCAGTGGTTT TAGGGCACCT AAAGGCAAGT TAA
|
Protein sequence | MGSDMKKMKK SALDLLDNIY SLAYWMTGSE DVSSDLVYCT YLSASMESEE RVLLKSFREC YVNRFGQYTD FCTGEKSDQC HLQPLDSLIP WAADMKLSVL LSEISGLKHL QIAEIVGKPV ETVRLWLLWG RKILSLANQN PVVLGHLKAS
|
| |