Gene Ppha_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1155 
Symbol 
ID6462986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1206089 
End bp1206541 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content43% 
IMG OID642727403 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002018047 
Protein GI194336253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTCAG ACATGAAAAA GATGAAAAAG AGTGCTCTTG ATCTTCTCGA TAATATATAC 
TCTCTTGCAT ACTGGATGAC GGGAAGCGAG GATGTATCAA GCGACCTGGT TTACTGTACT
TACCTCTCTG CAAGTATGGA AAGCGAGGAA AGAGTTTTGC TCAAAAGCTT CCGTGAATGT
TACGTAAACC GCTTTGGTCA ATACACTGAT TTCTGTACAG GTGAAAAGAG CGACCAGTGC
CATCTGCAAC CTCTCGATTC ATTGATTCCT TGGGCAGCAG ATATGAAACT CTCCGTTCTG
TTGAGCGAAA TATCTGGTCT GAAACATCTT CAGATAGCAG AGATTGTTGG AAAGCCAGTT
GAAACCGTAA GACTGTGGCT GTTATGGGGA AGGAAAATCT TGTCTCTGGC AAATCAAAAT
CCAGTGGTTT TAGGGCACCT AAAGGCAAGT TAA
 
Protein sequence
MGSDMKKMKK SALDLLDNIY SLAYWMTGSE DVSSDLVYCT YLSASMESEE RVLLKSFREC 
YVNRFGQYTD FCTGEKSDQC HLQPLDSLIP WAADMKLSVL LSEISGLKHL QIAEIVGKPV
ETVRLWLLWG RKILSLANQN PVVLGHLKAS