| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1124 |
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| Symbol | |
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| ID | 6462741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1161568 |
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| End bp | 1162752 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727370 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002018020 |
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| Protein GI | 194336226 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0803349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATCCG AAGATCAGCT AAAAGTATTA TTGACCGATA TGGAGGCCGA TACTATTGAA
CGAACGACAG CAGTAAGTGA TACCGATAAA TTCAGTCAGG CGATCTGTGC ATTTGCCAAT
GATTTGCCCA ATCATCGAAA CCCGGGTTAT CTTTTGATAG GAGTAACGGA CAAAGGAGTT
CTGTCCGGGC TGACTGTTAC TGATGAACTC CTCAAAAACC TTGGCGGTAT TCGCTCTCAA
GGCAATGTGT TACCCCAGCC TTACATGACT GTCGCCAGAT TCGCACTCTC CGGTGGAGAT
GTAGCTGTTG TTGAAGTTCA TCCCTGTGAT CTTCCCCCGG TGCGTTATAA AGGACGGGTG
TACATCAGAG TCGGGCCACG GAAAGGCATT GCCAATGAGC AGGAAGAGCG TGTTCTTACA
GAACGGCGTG TTGCCCTTGC CCGCTCTTTT GATGCCCGTC CTTGTTCAGA AGCAACAATT
GAAGACATCG CGTTAGGTCA ATTTGATGCC TATCGGCGGG AAGCTGTTGA TCCTGAAACC
ATTGCGGCAA ACAATCGAAA TATTGAATTA CAGTTGGCAT CTTTGCGGTT GTACGACCCC
AAACCAGCCT GCCCAACGTA TGGCGGTATA TTACTTTTTG GGAAAAACCC CAGATTCTTT
TTACCAGGAG CTTATGTTCA ATATCTCAAG CTACCCGGAA CAGATTTGAC GGAACAGCCT
GACGACCAGT CAGAGATTTC CGGCGACCTT CACACCTTGT TACGAGAGCT GGAAGGGAGA
ATCAAGCTTC TGATACAGAC AACCATGCGC AAGGTCACTG CCTTTGAGGA AAAACTGCAA
CCTGACTATC CCGAGTGGGC GTTACGGGAG CTGCTTATGA ATGCGGTTAT GCACCGTAAC
TACGACAGTA ATTCACCAAT TCGCTTTTAT GCATTCATCG ATCATCTTGA GATCCAGAGT
CCAGGTGGTT TGTATGGTGA GGCTACACCG GAAAACTTTC CTACTCGTAA CAGTTACCGT
AATCCAGTTA TTGCTGAAGC CATGAAATCA CTCGGTTTTG TGAACAGGTT CGGCTATGGT
GTTCAGCGAG CGCAAGCGCT TTTGGTACAG AACGGCAACC CTCCTGCTCA ATTTGAGTTC
GATGAGCACT CCGTATTGGT CAAGATCTTC AGGAGGTTGA CATGA
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| Protein sequence | MLSEDQLKVL LTDMEADTIE RTTAVSDTDK FSQAICAFAN DLPNHRNPGY LLIGVTDKGV
LSGLTVTDEL LKNLGGIRSQ GNVLPQPYMT VARFALSGGD VAVVEVHPCD LPPVRYKGRV
YIRVGPRKGI ANEQEERVLT ERRVALARSF DARPCSEATI EDIALGQFDA YRREAVDPET
IAANNRNIEL QLASLRLYDP KPACPTYGGI LLFGKNPRFF LPGAYVQYLK LPGTDLTEQP
DDQSEISGDL HTLLRELEGR IKLLIQTTMR KVTAFEEKLQ PDYPEWALRE LLMNAVMHRN
YDSNSPIRFY AFIDHLEIQS PGGLYGEATP ENFPTRNSYR NPVIAEAMKS LGFVNRFGYG
VQRAQALLVQ NGNPPAQFEF DEHSVLVKIF RRLT
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