| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1031 |
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| Symbol | rplU |
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| ID | 6461237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1065873 |
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| End bp | 1066163 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642727282 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_002017932 |
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| Protein GI | 194336138 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00139927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGCGC TGATCAAGAT TTCCGACAAA CAATATCTGG TAAAACAGGG GGATACGCTT
TTCGTTCCCA GACAAAAGAG TGCCGTTGGC GAAACCATGG CAATCAAAAC CATGGCACAA
ATTGACGGAG AAAATACCGT TCTGAACCCT GCAGGGAGCA TTCAGGCAAG AATTCTTGGT
CATGTCAAGG ATGAGAAGGT AATCGTTTTC AAGAAAAAAC GCAGAAAACG CTACCAGTCA
AGAAACGGAC ACCGTCAGCA GATGACCCAG ATCGAAGTTC TTTCGCTGTA A
|
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| Protein sequence | MQALIKISDK QYLVKQGDTL FVPRQKSAVG ETMAIKTMAQ IDGENTVLNP AGSIQARILG
HVKDEKVIVF KKKRRKRYQS RNGHRQQMTQ IEVLSL
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