| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1017 |
|---|
| Symbol | |
|---|
| ID | 6461595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 1052780 |
|---|
| End bp | 1053133 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642727268 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_002017918 |
|---|
| Protein GI | 194336124 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.128025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTC ATCTCGATAC ATCAACAGGC CAGTCCGTCG GCATAGTAAC ACTGAAGAAC
AGAATCGATG CGAGTAACAG CAGCGAACTG CAGAAGGTAT TTACGCAATG GTTGCAACAG
GCAAGTGTTT TTATTTTTGA CTGTAAAGAA CTCGACTTTA TTGACAGTTC CGGGCTCGGA
GCAATTGTCT CCTGCCTGCG CAAAGCGCTT GAACAGCATG GTGATCTGAA ACTTGCTGCC
CTTGGGCCAA AAGTATCCAT GATTTTTGAA CTGACAAAAG CAAAACAACT ATTTTCGATT
TTTTCTGACG CAACTGAAGC GCTGCAATCA TTCAGCACCG TTGGTACGAA ATAA
|
|---|
| Protein sequence | MIFHLDTSTG QSVGIVTLKN RIDASNSSEL QKVFTQWLQQ ASVFIFDCKE LDFIDSSGLG
AIVSCLRKAL EQHGDLKLAA LGPKVSMIFE LTKAKQLFSI FSDATEALQS FSTVGTK
|
|---|
| |