| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1015 |
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| Symbol | |
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| ID | 6463524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1051058 |
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| End bp | 1051381 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642727266 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_002017916 |
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| Protein GI | 194336122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000155666 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATCA GTGAAAAAAC CATCAACAAC TATAAAGTTC TCTCGTTGCG GGGTATGCTC
AATGCATCCT CTGCTCCGGC ACTGAAAACC TGCGTAGCCG GATTCCCCGA TGAACAGTCG
ATTGTCATTG ACCTGGAGAA CGTTGATTTT CTTGACAGCA GCGGCCTTGG TGCACTGGTA
GGAATTGCCC GAAAAAAAAA GGCGAGCAAA GCCATTATGA AACTGGCAAG AATGAATGAA
AGAGTCAAAA AAGTATTTGA AATAACACAG GCACACACCC TGTTTGATAT TTATGATGAT
GTTTCAGCCG CGGCTGATGC ATAA
|
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| Protein sequence | MNISEKTINN YKVLSLRGML NASSAPALKT CVAGFPDEQS IVIDLENVDF LDSSGLGALV
GIARKKKASK AIMKLARMNE RVKKVFEITQ AHTLFDIYDD VSAAADA
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