Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0953 |
Symbol | |
ID | 6460861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 992098 |
End bp | 993924 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642727207 |
Product | GTP-binding protein TypA |
Protein accession | YP_002017857 |
Protein GI | 194336063 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCGA CAAAAAATAT AAGAAATATT GCCATTATCG CTCACGTTGA TCATGGAAAA ACAACACTGG TTGATTCGAT TTTTCAGAAG ACAGGCGCTT TCAGGGATAA TCAGCAGGTA AACGTCCGGG TACTTGATTC AAATCCTCAG GAGAGAGAGA GAGGAATTAC CATATTTTCA AAAAACGCTG CGGCAGTATA CAAAGATCAC AAGATCAATA TTGTTGATAC ACCAGGTCAT GCTGACTTTG GTGGCGAGGT TGAACGTATT TTACAGATGG TTGACGGCGT ACTGCTTCTT GTTGACGCAT TCGAAGGCCC GATGCCGCAG ACCAAGTTTG TTCTGCGCAA AGCCCTTGAA CTGCATCTGA AGCCAATTGT GGTCATCAAC AAGATTGATC GGCCCCAGTC GGATCCAGTC AAGGTGCACG ATCAGGTTCT TGATCTCTTC ATCGCTCTCG GAGCAGAAGA GCATCAGCTT GATTTCCCCT ATATCTTTAC ATCGGCCAAA CATGGTGTTG CCAAATACAG CATGGATGAC GAAGATGGTG ATATGAGCCT TCTGCTCGAT ATGATCATCA AAGAGATTCC AGCTCCTGTC GCCCATGATG ATGGCGGATT CCAGATGCTG GTAACAACCC TTGACTACAG CGATTACATT GGCAAGATAG CCATTGGCCG TATTCATCGC GGAAAGGTAA GCCCGGGAAG TCAGCTTGCC GTGGTTGGTC CTGACGGGGT GATGGGCAGG GGAACCGTAA CAAAGGTTTT TCAGTTCGAC AAGGTTCAGA AGGTTGAAGC AAAAGAGGCT ACCTCCGGTG ACATCATTGC CATCGCCGGT ATTCCTGATG CTACTGTCGG CATGACCCTT GCTTCCATTG AGGATCCCGT ATCGCTGGCT TCATTCGATA TCAGCAAACC GACACTCTCC ATGCTTTTTT CGGTCAACGA CTCTCCCTTT GCAGGACTTG AGGGCAAGGA GGTCACCAGC CGGAAGATCC GTGAGCGCCT CATGAAAGAG AAGATGACCA ACGTCGCTCT CAACGTCGAG GAGACAGAGA GCCCCGATAC CTTCCGTGTT TCAGGAAGGG GAGAGCTTCA CCTTTCCGTG CTGATCGAGA CCATGCGGCG CGAAGGCTAT GAAGTTGCCA TTGCAAGACC CGAGGTTATC ATGCACCGTG ATGAGGATGG TACCCTGCTT GAGCCTATCG AGCATGTGAC CATCGACATT CCTGAAGAGT ACACTGGCGT TATCATTGAA AAAATGGGTC GCAGAAAGGC TGAGATGACC TTTATGGGCA CGCTTCGCGG CGGAATGGTC CGTGTTGAAT TTGAAATTCC TACCAGAGGG CTGATCGGTT ACAACCTTGA GTTTACCACC GACACCAAAG GCGAGGGCAT CATGTCACAC GTCTTCCTCG ACTACCAGCC ATTCAAAGGC AAATTGCCTT CACGCGAGAC CGGTGCACTG GTCGTTTCTG AAGCAGGTAT CTGCGTTGCC TATGCTCTCA GCGCCCTTGA AGATCGCGGC ACCTTCTTTG TTTCACCAAA CACCAAGGTT TATGCAGGCA TGATTGTCGG CGAATCGACA AGAGGTCTCG ATATTACCCT CAACGTCTGC AAAACAAAAA AGCTGAGCAA CATGCGCTCT TCCGGCACCG ATGAGTCACT TCGTCTCACC CCTCCAAAAA TCCTTTCGCT GGAACAGGCG CTGGAATTTA TCAACGACGA TGAGCTTCTG GAAGTAACAC CCCAGAGCAT CAGACTCAGA AAGAAGATTC TGGATGTGAA CCTTCGCGCA AAAGCGACCA AAAAGGCCAA CGCCTGA
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Protein sequence | MSSTKNIRNI AIIAHVDHGK TTLVDSIFQK TGAFRDNQQV NVRVLDSNPQ ERERGITIFS KNAAAVYKDH KINIVDTPGH ADFGGEVERI LQMVDGVLLL VDAFEGPMPQ TKFVLRKALE LHLKPIVVIN KIDRPQSDPV KVHDQVLDLF IALGAEEHQL DFPYIFTSAK HGVAKYSMDD EDGDMSLLLD MIIKEIPAPV AHDDGGFQML VTTLDYSDYI GKIAIGRIHR GKVSPGSQLA VVGPDGVMGR GTVTKVFQFD KVQKVEAKEA TSGDIIAIAG IPDATVGMTL ASIEDPVSLA SFDISKPTLS MLFSVNDSPF AGLEGKEVTS RKIRERLMKE KMTNVALNVE ETESPDTFRV SGRGELHLSV LIETMRREGY EVAIARPEVI MHRDEDGTLL EPIEHVTIDI PEEYTGVIIE KMGRRKAEMT FMGTLRGGMV RVEFEIPTRG LIGYNLEFTT DTKGEGIMSH VFLDYQPFKG KLPSRETGAL VVSEAGICVA YALSALEDRG TFFVSPNTKV YAGMIVGEST RGLDITLNVC KTKKLSNMRS SGTDESLRLT PPKILSLEQA LEFINDDELL EVTPQSIRLR KKILDVNLRA KATKKANA
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