| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0889 |
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| Symbol | |
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| ID | 6461044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 928029 |
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| End bp | 929420 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727143 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002017793 |
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| Protein GI | 194335999 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTA GAAATCTGAC CGAAGAACTC ATGGGAAAAG ACAAATCCGA TCGCATTGAG
TTTATTGCAT CATCCCAGGC AGAAGAGTTG ATTGGCCGTG CCGTGTGTGC GCTGCTCAAC
ACCAAAGGTG GTAGCGTTCT GATCGGTGTC GATGATCATG GCCAGGTACT CGGCGAACCA
GGCGAAAAAG ATACTGAAGC ACTCCGTATC TTCCTGCATA AACATGTTAC CCCTCAGGTA
TTGTTCACCG TTACTCTGGA TGATGTTCAG GGAGGCAAGG TCATTTCTGT AGATGTACCG
GAAGGCTCTG ACCGCCCCTA TGTTTTCGAC GGGGCGATTT ACATCAAGAA GGGAACGAAT
ATTCGAGCGG CCGACGCTAC AACAATGCGC GATATGGTGG TACGGCAATC CCGTGAAACC
GAGCGCTGGG AACGTCGCGC TGCTGTCGGC CTTGCCATTG ACGATCTTGA TCGTAAACTG
CTGGATGAGA CGGTACGCAG GGCACAGGAT CGCCGAGGGT ATCAATTTGA AGAGGCTCAC
AACCCTGATA CCGTACTTGC AGACCTGGCC TTGGCCCGGT TCGGTCAATT GACCAATGCT
GCAGATGTGT TGTTTGGCAA GCGTGTTTCA CTGCGCCATC CGCAGACGCG ACTGCGGGCG
GTTCGCTATG AGACGGATCG CGGAGATAAT TTTATTGATG AACAGGTGTA CGAGGGGCCA
GCATTCTACC TCCTGGAAGA AGCGATGAAC TTTCTCAAAC GGCATGTTGC GATTGCTGCC
GAATTCAAGC CGGGACAACT GGCACGAGAA TCTCGACCAC ACTACCCATT CAACTCATTG
CGCGAAGGGT TGGTAAACGC GTTGGTCCAT CGCGACTATG CTGCATTCTC CGGCGGAATT
TCGATTAGTA TTTACCCGGA ACGAATTGAA ATCTGGAATT CAGGGCACCT TTCAATGGGG
CTGACTCCGG AAAAACTCCG GGCTGCTACC CATGAGTCAA TTCTTGTCAA CCCGGATATC
AGCCATGTCT TCTATCTGCA TGAGTTAATG GAACGGGTAG GACGCGGTAC ATTCAAAATT
GTCCAGGAAT GCCGCGAGAT GAAGATGCGC CCCCCGGTGT GGCAGAGCAA ATCATCTGGA
GTCCATCTGA CATTTTTCGG GGCCGGGCAA AAACAAATTT CGATAAAACT CAACGAACGA
CAACAAGCGC TGCTCAATGG GCTGGGTGTC AATGAATCAG TCCGCCTGGA CGAGTACCTT
GAACGAGCAG GTAGCGGCAT CAGTGACCGA CAAGCCCGTC GAGATCTTCG AAATTTAGTG
GATGCCGGAT TACTCGATCC AATTGGAGCT GGTCCTGCAA CGTCCTATCG TCGAACCGAG
GTGGAAATCT GA
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| Protein sequence | MNVRNLTEEL MGKDKSDRIE FIASSQAEEL IGRAVCALLN TKGGSVLIGV DDHGQVLGEP
GEKDTEALRI FLHKHVTPQV LFTVTLDDVQ GGKVISVDVP EGSDRPYVFD GAIYIKKGTN
IRAADATTMR DMVVRQSRET ERWERRAAVG LAIDDLDRKL LDETVRRAQD RRGYQFEEAH
NPDTVLADLA LARFGQLTNA ADVLFGKRVS LRHPQTRLRA VRYETDRGDN FIDEQVYEGP
AFYLLEEAMN FLKRHVAIAA EFKPGQLARE SRPHYPFNSL REGLVNALVH RDYAAFSGGI
SISIYPERIE IWNSGHLSMG LTPEKLRAAT HESILVNPDI SHVFYLHELM ERVGRGTFKI
VQECREMKMR PPVWQSKSSG VHLTFFGAGQ KQISIKLNER QQALLNGLGV NESVRLDEYL
ERAGSGISDR QARRDLRNLV DAGLLDPIGA GPATSYRRTE VEI
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