Gene Ppha_0862 details

Gene Information

• Locus tag: Ppha_0862
• Symbol: smpB
• ID: 6461110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 901123
• End bp: 901596
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642727117
• Product: SsrA-binding protein
• Protein accession: YP_002017767
• Protein GI: 194335973
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAAAA AGCAACAGAC TCAGCAATAT GTTCAGGCCA TTCAAAACAG AAAGGCCCGG 
TTCGAATTTG AAATTCTCGA TACCCTCGTT GCCGGTATCC AGCTTTTTGG AAGCGAGGTG 
AAATCGGTAC GCCTGGGGCA AGCGAGTCTG AGCGACAGCT TTGCCATCAT CCTTCGTAAT 
GAGATCTGGC TTGAAGGTAT GCAGATTACT CCGTATGCGC ATAACCGGAT GGAGCTGATT 
GAAGCGAAGC GGAGTCGTAA ACTGCTGCTG CATAAAGAGG AAATCCGCAA AATCGAGGCA 
AAAATCAGTG AAAAAGGGCT TACGCTGGTG CCATTGAAGG CCTTTTTCAA CTCGAAAGGC 
CTCCTGAAAA TTGAACTTGC CATAGCCAAA GGCAAAAAGC TCTACGACAA GCGCGAAACG 
ATCAAGGCGA GGGAAAATCA GCGTCAGATG GAGCAGATAA AAAAACAATA CTAA 

 

Protein sequence

MAKKQQTQQY VQAIQNRKAR FEFEILDTLV AGIQLFGSEV KSVRLGQASL SDSFAIILRN 
EIWLEGMQIT PYAHNRMELI EAKRSRKLLL HKEEIRKIEA KISEKGLTLV PLKAFFNSKG 
LLKIELAIAK GKKLYDKRET IKARENQRQM EQIKKQY