| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0840 |
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| Symbol | trpA |
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| ID | 6461169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 876222 |
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| End bp | 877025 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727092 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002017746 |
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| Protein GI | 194335952 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA ATCGAATTAC CCAGTTGGTG AAGCAGGATA AAAAATTCCT GATTGCCTAT
TATATGCCGG AATTTCCGGT AACTGGCTCG ACGCTCCCCG TGCTTGAGGC GCTTGAGGAG
AGCGGGGTTG ATATCATTGA GCTTGGTATG CCCTATTCTG ACCCGATAGG CGATGGGCCA
GTGATTCAGG ATGCAGCCCA TACCGCTATC CGTAACGGTG TGACCATCAA ATATCTTCTT
GAACTGGTAC GCAGAGCCCG GCAGGGCGAA GGGTGCAAAA AAATTACAGC CCCCATCCTT
CTGATGGGCT ACTGCAACCC CCTGATTGCT TACGGTGGTG ATTGTTTTCT GCATGATGCC
CTTGAGGCGG GAGTTGACGG ATTGCTTATT CCCGATCTTC CTCCCGAGGA GGCGGCAGAT
TTTCTCGAAA AAGCAAAGGG GTTTGGCCTT ACCGTTGTCT TTCTTGTTTC ACCGGTTACT
CCACCCGAAA GGATAGAGCT GATCGACAGC CTCTCGACCG ATTTTTCCTA CTGTCTTGCG
GTCAATGGTA CAACAGGGAC AGCGAAGCTT TCCGATACGG CGACAGAGTC AGCGGTTGAT
GACTATCTGA AAAGGGTACG CCAACATGCC CGGAAAAAAT TTGTTGTCGG TTTTGGCATC
AAGGATAAGG CGCAGGTAGA GCATATGTGG AACTTTGCAG ACGGAGCCGT CGTGGGAAGT
GCCCTTTTGC AGTACATCGC AGCTTCTGCA ACTCCTGAAG AGACAGCCCG CCTGGCCGCG
GAGTTCTGGA AAACGTTGCG CTGA
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| Protein sequence | MSENRITQLV KQDKKFLIAY YMPEFPVTGS TLPVLEALEE SGVDIIELGM PYSDPIGDGP
VIQDAAHTAI RNGVTIKYLL ELVRRARQGE GCKKITAPIL LMGYCNPLIA YGGDCFLHDA
LEAGVDGLLI PDLPPEEAAD FLEKAKGFGL TVVFLVSPVT PPERIELIDS LSTDFSYCLA
VNGTTGTAKL SDTATESAVD DYLKRVRQHA RKKFVVGFGI KDKAQVEHMW NFADGAVVGS
ALLQYIAASA TPEETARLAA EFWKTLR
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