| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0800 |
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| Symbol | |
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| ID | 6461267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 837453 |
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| End bp | 838985 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642727053 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002017707 |
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| Protein GI | 194335913 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATGA ATTTGACATG CCTGATACGT TTTGCCTGCC GGATGAGCGC TCTTGTTGCG
CTTCTTGTTG GCACTGTACC CATGGCTACA ATGGCCTCTC CTGAACCCGT GAGGAGAAGG
GACGACTCGT ACGTAACCGT TGTGTCTGAA ATGACTGCTC CATCGATTTA TCTTGTGCCT
CTGGGCGAAT CGAGGGTTTA CCGGTTCGCG CAACCCATCA AACGTGTTGC CATGGGCGAC
CCCAAGGTGG CCGACTATAT CATGCTTAAC CGCTTCGAAG TTTATTTGCT GGGAAAAAAA
ATGGGCTCAA CCAATCTTGC TGTATGGGAC CAAAATGGCA ACCTGACCTC CTCGCCGGTA
CAGGTCAGCC GTGGCACAAC CGCCCTGCAA GCTCTCTTAA AAGTTCTTTT TCCGAAAGAG
AACGACATTC ATCTCCTTGC CCTTGGTCCA GCTCTGGTAC TCTCCGGCTC TGTGTCTGAC
GCCCTGGTTG CAGAGAGCGT CGCTCGCTTG GTAAGATCGT ATTTTGGTGG CTCGGTTTCA
AGTGGTACTC CGGAATCAGC CCTTGTCGGC ACTGACTCCA AGCCGTTTAC CGGTATAATT
GAAGAGATGA GTAAGGACGT TGTTTTTTCC AAAACGGAGT CTCATTCTAA AGAAACCACA
ACGCATGGAG GGGAATCTGA CAGCACGCGC GGCGTAGTCA ATCTGCTCAA GGTGCGCGAT
TCGCAGCAAG TCCGGCTCGA AGTCTGCATT GCCCAGGTAT CGAGGACTTT TATCGAATCT
TTGGGTATCA GCTTCTTTAA AACCTCTGGT GATATACAAG GAAGCACCCT TTTATCAGGG
TTTGTCAGCA ACGCTACGCT TAATAATCTT TTGCTGGGTC GGCTGGGTCA GGCCAATGGG
ATCAAAATGG TTGCGGACCG CAAACCATCG TTGTTCAAGG TACTTGCCGA ACCCACCATT
GTCACTATGA GTGGCAAAGA GGGTTTTTTT CTGGTTGGAG GTAAAATTTA TGTACCTGTA
AGAGTCATCG ATTACAGCCC AATAAATCTC CAAGAATATG ACAAATACTA TATTTCCTAC
AAAGAATACC TTTATGGAGT AGGTTTACGC TTTATGCCCG TTGTGCTGGA TGCTGGCCGT
ATTTCGCTCA AGGTCGTATC CGAGGTTTCC GAGCCTGATA CAGAATCTGC CACTTCGGGG
ACTAAAGCTA ATTTGCCCTT GTTTAAAATC AGCACCGTTT CCACCAACGT TCAGATGAAC
GAGGGTGAAA ACCTTGTTAT TGGCGGACTC AAGCTCGACA ATTTTGCCAA TGCGATTGAT
TCGGTGCCTT TGCTGAGTGA AATTCCCATT CTTGGTGCGC TTTTTCGGGA CACCAAGAAG
AATGCCGAGA AGACCGAACT CATGGTCATT ATTCGCCCCA CTTTGGTCAA AGGCAGCGCC
ACCATGCCAG AGCTTCCAAC TGACAGAGTT ATTCCTCCTA CCCGAAAAGA GCTTTTCCTC
GATGGAAAAC TTGAAGGATC ACCACTAAAA TGA
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| Protein sequence | MQMNLTCLIR FACRMSALVA LLVGTVPMAT MASPEPVRRR DDSYVTVVSE MTAPSIYLVP
LGESRVYRFA QPIKRVAMGD PKVADYIMLN RFEVYLLGKK MGSTNLAVWD QNGNLTSSPV
QVSRGTTALQ ALLKVLFPKE NDIHLLALGP ALVLSGSVSD ALVAESVARL VRSYFGGSVS
SGTPESALVG TDSKPFTGII EEMSKDVVFS KTESHSKETT THGGESDSTR GVVNLLKVRD
SQQVRLEVCI AQVSRTFIES LGISFFKTSG DIQGSTLLSG FVSNATLNNL LLGRLGQANG
IKMVADRKPS LFKVLAEPTI VTMSGKEGFF LVGGKIYVPV RVIDYSPINL QEYDKYYISY
KEYLYGVGLR FMPVVLDAGR ISLKVVSEVS EPDTESATSG TKANLPLFKI STVSTNVQMN
EGENLVIGGL KLDNFANAID SVPLLSEIPI LGALFRDTKK NAEKTELMVI IRPTLVKGSA
TMPELPTDRV IPPTRKELFL DGKLEGSPLK
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