| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0782 |
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| Symbol | gltD |
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| ID | 6461310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 819054 |
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| End bp | 820529 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642727036 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_002017691 |
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| Protein GI | 194335897 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAG TTAAAGGTTT CATGGAGTAT CAGAGAGCAT TGCCCTTGGA CAGAGCGCCT
CTGGAGAGAA TACACGACTG GCAAGAGTTT CACAAAGAGA TGGAGGCCGG GGAACTGCAG
GAGCAGGGCG CCCGTTGTAT GGATTGCGGT ACACCATACT GTCATACCGG ATTTATGCTG
AGCGGTATGA CGAGCGGTTG TCCCATTCAC AATCTTGTTC CTGAGTGGAA TGACTATGTT
TATAAAGGGT TCTGGCACGA GGCCTACGAT CGGTTGATGA AAACCAACAA CTTTCCTGAA
TTTACAGGCA GGGTCTGTCC GGCTCCGTGT GAAGGTTCCT GCGTGCTTGG TCTCATTGAA
CTGCCGGTTA CCATCAAGAA TATTGAATGC TCTATTATTG AGCATGCCTT TACTGAAGGG
TGGGTAGTCC CAAAACAGAT TGCCAACAGA ACCGGAAAAA GGGTGCTCAT TGTCGGTTCA
GGTCCATCGG GACTTGCCTG TGCTGATCAG CTCAACAAGG CTGGACACAG CGTTACCGTC
TTCGAGCGAG ATGATCGTTT TGGCGGTCTC ATGATGTATG GTATTCCGAA CATGAAGCTC
GACAAACGGC TTGTTGTAGA GCGTCGTATT GAGCTGATGA AGAGTGAGGG AATTACCTTC
GTGGAGCGCA CAGAGGTTGG TGTTGACTAT CCGGCAGACA AGCTCCTTGA AGAGTTTGAT
GCTGTTGTGC TCTGTACGGG TGCTACAAAG CCCCGCAACC TTGCTGCAGA GGGACGTGAA
TTTTCAGGTA TCCATTATGC CATGGATTTC CTGCGTTCAA GTACCAAAGC CTTGCTTGAC
GACACTACAC CAGCTCTTTC AGCCGCAGGC AAAAATGTTG TTGTTATTGG TGGAGGCGAT
ACCGGTACCG ATTGCGTTGC CACATCATTG CGTCAGGGGT GTATAAGTGT TTTGCAGCTT
GAAATCATGC CGAAACCGCC TCTTGATCGT CAGCCAGAAA ATCCCTGGCC CGAATGGCCT
AAAACCTTCA AGGTTGATTA TGGGCAGGAA GAGGCAGCGT TTCTGCAGGG AGAAGATCCG
CGACAATACT CCATCATGAC CAAGAAGTTT CTTGCTGATG AAACAGGTGC TGTGCAGGCA
GTTGAGGTAT CCAGAGTGGA ATGGGTTACA GAGGATGGCC GTTTTGTGCC ACAGCCCGTT
GCAGGTACGG AACAGATCAT ACCGGCAGAG TTTGTTTTGC TGGCGATGGG CTTTGTTGGG
CCAGAGGAGC ATCTTCTGCA GCAACTGCAG GTTGTTCAGG ATGAACGTTC AAATATCAAG
GCGACAGAGA AAAACTATCG TACCAACCGC GACGGAATTT TTGCTGCTGG CGATGCCCGC
AGGGGACAGA GTCTTGTGGT TTGGGCCATT CATGAGGGCC GCTCTGCTGC ACGTGAGTGT
GACCGGTTTC TGATGGGCTA CACAAATCTG CCGTAA
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| Protein sequence | MGKVKGFMEY QRALPLDRAP LERIHDWQEF HKEMEAGELQ EQGARCMDCG TPYCHTGFML
SGMTSGCPIH NLVPEWNDYV YKGFWHEAYD RLMKTNNFPE FTGRVCPAPC EGSCVLGLIE
LPVTIKNIEC SIIEHAFTEG WVVPKQIANR TGKRVLIVGS GPSGLACADQ LNKAGHSVTV
FERDDRFGGL MMYGIPNMKL DKRLVVERRI ELMKSEGITF VERTEVGVDY PADKLLEEFD
AVVLCTGATK PRNLAAEGRE FSGIHYAMDF LRSSTKALLD DTTPALSAAG KNVVVIGGGD
TGTDCVATSL RQGCISVLQL EIMPKPPLDR QPENPWPEWP KTFKVDYGQE EAAFLQGEDP
RQYSIMTKKF LADETGAVQA VEVSRVEWVT EDGRFVPQPV AGTEQIIPAE FVLLAMGFVG
PEEHLLQQLQ VVQDERSNIK ATEKNYRTNR DGIFAAGDAR RGQSLVVWAI HEGRSAAREC
DRFLMGYTNL P
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