Gene Ppha_0714 details

Gene Information

• Locus tag: Ppha_0714
• ID: 6461470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 740063
• End bp: 743467
• Gene Length: 3405 bp
• Protein Length: 1134 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642726971
• Product: Cadherin
• Protein accession: YP_002017626
• Protein GI: 194335832

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.48369
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGCTG GCTCTCTTGC AAGTTGGGAA TACCTTGCTT CCCACACCGA TTTAATGACA 
TGGCTTCGTG CTGATGGCGT AACAGACGCT GACTCGGCTA CGGCAACGAG GCATTACATT 
GAGCATGGAA TTAGCGAAGG ACGTACCATA ACCTTTAATG CATGGGAGTA TCTTGCCTCC 
AACCCGGACT TGATGAATTG GCTTCGTGCT GATGGCGTCA CCGATGCCGA TGCTATCACT 
GCGGCTAAGC ATTTCATTGG ATATGGATAT AATGAGGAAC GTACCATAAC CTTTAATGCA 
TGGGAGTATC TTGCCTCCAA CCCGGACTTG ATGAATTGGC TTCGTGCTGA TGGCGTCACC 
GATGCCGATG CCATCACGGC AGCGAAGCAT TTCATTGGAT ATGGATATGA TGAAGAGCGT 
ACCATCACCT TTGATGTATG GGAGTATCTT GCCTCTAACC CGGACCTGAT GAATTGGCTT 
GGAGCTGATG GCATAACTGA TGCTGATGCC ATCACGGCAG CGAAGCATTT CATTGCATAT 
GGATATAATG AGGGCCGTAC AATGATTTTC GATGCTGCGG CATATCTTGC ATCCTATGAA 
GATTTGCGGA ATGCATTCGG AAATGATACT CTTGCTGCCA CAATACATTA TGTGACATAT 
GGATATAGGG AAGGTCGTGC AGTAAATAAC TACCACCCAA CACTTACCGT CGACAATGCC 
ATAGTCACTA TGGCTGAAAA CCATGTTTCC GGTGCAATTA TCGGCGCTGA TGCCGATGCG 
ACCGATGCAG ATGGCAACAC CATCACCTTC AGCCTGGTAA ATGCACCTGC CAATAGCAGC 
GGTAACGCAC TGTTCAGCAT TGATGCTGCA ACAGGCCAGA TAAACCTTAC AGCAGCAGGA 
GCTGCAAGTA TCGACTATGA ATCATCTATT AAAAGCTATA CGTTGCAGGT TATGGCCAGC 
GATGGCGTCG CCGCTCACAA TGAAATAAAA ACCATCACGC TCAACCTGAC CAACGTTGAC 
GAGATCGCCC CTGTTATCAC CACTGCCGCC ACACAATCTG TGGCTGAAAA CACAATCCTG 
GTCGCCGCAC TAACATCAAC CGACGTCGAT TCTGCTGACA CACCTGCGAT ATTCAGCATC 
ACCGGTGGCA CAAACGCAGC ATTGTTCGAG ATCGTTGCCG GAAACCTCCA GTTCAAGGCC 
GCTCCCGATT ACGAAACCGG CGCCCATAGC TATGAAGTAA CTGTAACTGC TACAGACGGG 
ACAAACAGCA CAGCAAAAAC CATTACAGTC GGCATTACTG ACGTTAATGA CGTAACCCCT 
GTCATCACCA CAGCCGCTGC CCAGACGGTA GCTGAAAACA CAACTCTGGT TGCTGCACTG 
ACATCAACCG ACGTCGATAC TGCAGGCACG AACCCGGCGA TATTCAGCAT CACCGGTGGC 
ACAGACGCAG CGTTATTCGA GATCGTTTCA GGAAACCTCC AGTTCAAGGC CGCTCCCGAT 
TACGAAACCG ACGCCCACAG CTACGAAGTA ACGGTAACTG CTACCGACGG CACAAACAGC 
ACAGCAAAAA CCATTACAGT CAACCTGACC GATATTTTCG AAAATACAGG TTTACTGCTT 
GAAGGAGACA GTAATGATAA CCGACTTACC GGAGGCACCG GTAACGACAC CCTTGTTGGC 
GGTAATGGCA ATGATATCTT GAGAGGCGGC GCCGGAACAG ATAGTATGGA TGGTGGCGCT 
GGTGACGATA CCTTTGTCAT TGTTGGCGAT CTTTCTGGCG GCGGAAAAGT GGGTTCCCCT 
GAAGATACTG TAGCACTTGG GCACCCCCTT TCTGATCTGA ACGGTCAGGA TCTGAATGAG 
GATAACAACG GCGCTGTGGA AACGATTGTC GGTGGAGAAG GAAACGATAC GCTTTACGTC 
TATGGTACTG CCGATCTTTC CCACTATGTA ATTTCCGGCA TTGAACATTT TGAGATACGC 
TCTTACGTTA CATTCAGCCA AAGCTTTCTT GATAACCTGA TCGCAACAGG AGGAGTCACC 
TTGACCGGTG ATGGATCCAG TACGATTGTC TTGACTGGTG GCACTGCAGC CGATCCACTG 
ATTATTGATT TAACCACTAC AGATGCAGCT ATTCTTGCGC GTATCGGCCA AATTTCATTG 
GGTGAGCATG TTATTCTGAG AATCAATGAC CTTGACCAGT TGGGAGGAGC AAGGATTCTT 
ACTGGATCAG GCACAATTGA AGCTCTCTCA GGAAGCCTTG ATATACCTTC GACTTATATA 
CTGACGGATA CCTTGCAGGT TGTGAATATC ACTCTTGATA ATCCGGAAAT AATGTCTGTT 
ATCAATGGTG AACATAGAGA CCTGGATAAC AATGGAGTAT TCGACACAAT TTTTGGTACA 
AATGACAATG ATTACATAAT TGGTACAGCG TTTGATGATA CCCTTGATGG CTTAAACGGT 
GATGATCTAT TATCAGGCAA AGAGGAAAAC GACACATTCA AAATCAACGG TAGTGGTGAA 
AAAACAATTA TTGACAGTGG TGGTGATCAT GATACCCTTG ATCTTTCCGG GTCTGTTTCT 
GGCGCCTCGG TTAATTTAAG TGATGGAGGT ACTGCCGGCA GTGCTACCAT AATTTTAGGC 
AGTGGAACAA CCGCCATTAC AAAACAGGCG ATAGATTTAT TCCTTCTTCA GGATATTTCA 
GGTTCTTATG GCGACGATAT TGCAAATTTG AAACAAATTA TTGCTACTCC TGATGGATTG 
GCTGAAGATA TTCGCAATAT ACAACCAGAC AGCTTTTTTG GTCTTGGTAT CTTCAATCCT 
CCAAGTGGAA CAAATCCATA TTATGAAACA CTGTTGCCGT TATCAGTTGA TCTTAATCTA 
TTTAAGGATG CAGTAAATCA ACTTGGAATA TGGGGTGATG AGGAGTTGCT TACTGCAATC 
AGGACAGTTG TTGATCGGGC AGAAACTGCT GAAATAGGAT ATGGAAGAAA CGCACTGCGG 
ATTTTGTTGA TTTCCACCGA TGAACCATTC TATGAAGATA TTCCGATAAA TATTCCGCAG 
TTGGCTGCTG ATATGCAGGC AGTTGACATC TATCCTGTTT TTCTTGTTAC AAATGATTTG 
GTTTCATATT ACGAAGACTT TGTCGTTCAA CTGGGTGTCG GTGATGTCGT TGGCATGGCA 
TCAAACAGCA GCGATATCTT GTCGGCAATT AACAGCGCAT TTGTAAATTA CAAACATGAC 
TTTATCGAAA ATGTCAAAGG CACTGCCTAT GACGACACCC TTACCGGAAA CAGCCTTGAT 
AACCACATTG ACGGTGGCGC CGGTGATGAC ATATTGAAAG GTCTTGTCGG AAATGACACC 
ATTGATGGCG GTAAGCGCTC AACAATAAAT TATTCCGTAA TATAA 

 

Protein sequence

MVAGSLASWE YLASHTDLMT WLRADGVTDA DSATATRHYI EHGISEGRTI TFNAWEYLAS 
NPDLMNWLRA DGVTDADAIT AAKHFIGYGY NEERTITFNA WEYLASNPDL MNWLRADGVT 
DADAITAAKH FIGYGYDEER TITFDVWEYL ASNPDLMNWL GADGITDADA ITAAKHFIAY 
GYNEGRTMIF DAAAYLASYE DLRNAFGNDT LAATIHYVTY GYREGRAVNN YHPTLTVDNA 
IVTMAENHVS GAIIGADADA TDADGNTITF SLVNAPANSS GNALFSIDAA TGQINLTAAG 
AASIDYESSI KSYTLQVMAS DGVAAHNEIK TITLNLTNVD EIAPVITTAA TQSVAENTIL 
VAALTSTDVD SADTPAIFSI TGGTNAALFE IVAGNLQFKA APDYETGAHS YEVTVTATDG 
TNSTAKTITV GITDVNDVTP VITTAAAQTV AENTTLVAAL TSTDVDTAGT NPAIFSITGG 
TDAALFEIVS GNLQFKAAPD YETDAHSYEV TVTATDGTNS TAKTITVNLT DIFENTGLLL 
EGDSNDNRLT GGTGNDTLVG GNGNDILRGG AGTDSMDGGA GDDTFVIVGD LSGGGKVGSP 
EDTVALGHPL SDLNGQDLNE DNNGAVETIV GGEGNDTLYV YGTADLSHYV ISGIEHFEIR 
SYVTFSQSFL DNLIATGGVT LTGDGSSTIV LTGGTAADPL IIDLTTTDAA ILARIGQISL 
GEHVILRIND LDQLGGARIL TGSGTIEALS GSLDIPSTYI LTDTLQVVNI TLDNPEIMSV 
INGEHRDLDN NGVFDTIFGT NDNDYIIGTA FDDTLDGLNG DDLLSGKEEN DTFKINGSGE 
KTIIDSGGDH DTLDLSGSVS GASVNLSDGG TAGSATIILG SGTTAITKQA IDLFLLQDIS 
GSYGDDIANL KQIIATPDGL AEDIRNIQPD SFFGLGIFNP PSGTNPYYET LLPLSVDLNL 
FKDAVNQLGI WGDEELLTAI RTVVDRAETA EIGYGRNALR ILLISTDEPF YEDIPINIPQ 
LAADMQAVDI YPVFLVTNDL VSYYEDFVVQ LGVGDVVGMA SNSSDILSAI NSAFVNYKHD 
FIENVKGTAY DDTLTGNSLD NHIDGGAGDD ILKGLVGNDT IDGGKRSTIN YSVI