| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0559 |
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| Symbol | |
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| ID | 6461846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 546226 |
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| End bp | 547344 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642726834 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002017489 |
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| Protein GI | 194335695 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0160035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTTC TTGTAACCGG GTCGAAGGGT TTTGTAGGCA GGAATCTTTG TTCTGTTTTG
CGTACGATGG AGAGTATACA GCTTGTAGAA TTTGATTGTG ATAATACTTC TGCGGAACTG
GAGCCTATGC TTGGTGAGGC TGAGGTAGTT TTTCATCTTG CCGGAGTTAA CCGTCCGAAA
AACGATGAGG AGTTCAGGAG CGGAAATACG GGGTTGACTG AAGAACTATG TGCTATTCTT
CAGCGGTTGG AACGGACTCC GAAGATTATT TTGGCTTCTT CCATTCAGGC AGAACTTGAC
AATCCTTATG GTAGCAGCAA GTTGCAGGCG GAACAAGTAC TACGGGGTTT TGCAGAAATA
ACCAGTGCAC GGGCGGTTGT TTACCGCTTT AAGAATCTTT TTGGTAAATG GTGCCGTCCA
AACTACAATT CGGTGACAGC AACTTTTTGC CATAATATTG CTCACGGGTT ACCGGTTACT
ATTTCCGATC CGGGTCGCTC GCTTGAGTTG ACCTATATTG ATGATGTTGT TGCTGCATTG
GTTGGTGAAA TTCCTGCAGA GGAAGGAGTG AAGGAATCAG GCTTTGCATT TGGTGCGGAT
CTTAGTGCAT ATTCCATAAC ACTTGGCGAG CTTGCAGGCT TGATTACATC ATTTCGCGAA
TCACGTCAAA CCCTTGTTTT ACCTGGTTTT GACAGTCTAT TTGTCAAGGC GCTTTATGCT
ACCTATCTCT CCTATCTTGA GGGCGATGAT TTTGCCTATC CGCTTCAGAT CAGATCTGAC
GAACGGGGAA GCCTTGCCGA AATGTTGAAG AGCAACGCGT TTGGGCAGAT TTTTGTTTCA
CGTACCAAGC CGGGGATTAC CAGAGGCAAC CACTATCACC ATACCAAAAC GGAAAAGTTC
ATGGTTGTGG AAGGAGATGC GGTGATTCGT TTCCGGCAGA TTGATGGAGT AGAGGTGATC
GAACATCGGG TCTCTGGAAA AGAGTTTCGT GTTGTCGATA TACCTCCAGG TTATACACAC
CACATCAGCA ATATCGGTGA AAATGAACTG GTAACCCTTT TCTGGGCCTC CGAGATATTT
AATCCGGAAA AGCCGGATAC TTACTTTTTG CAGGTCTGA
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| Protein sequence | MNVLVTGSKG FVGRNLCSVL RTMESIQLVE FDCDNTSAEL EPMLGEAEVV FHLAGVNRPK
NDEEFRSGNT GLTEELCAIL QRLERTPKII LASSIQAELD NPYGSSKLQA EQVLRGFAEI
TSARAVVYRF KNLFGKWCRP NYNSVTATFC HNIAHGLPVT ISDPGRSLEL TYIDDVVAAL
VGEIPAEEGV KESGFAFGAD LSAYSITLGE LAGLITSFRE SRQTLVLPGF DSLFVKALYA
TYLSYLEGDD FAYPLQIRSD ERGSLAEMLK SNAFGQIFVS RTKPGITRGN HYHHTKTEKF
MVVEGDAVIR FRQIDGVEVI EHRVSGKEFR VVDIPPGYTH HISNIGENEL VTLFWASEIF
NPEKPDTYFL QV
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