Gene Ppha_0540 details

Gene Information

• Locus tag: Ppha_0540
• ID: 6461916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 528575
• End bp: 529138
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 642726826
• Product: transposase
• Protein accession: YP_002017481
• Protein GI: 194335687

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGAAT CAGCAAAGCA GTTGATTGCT GAAACAAGAA CACTGATACC GGCAAGAGCT 
GGGCAGTTGG CCAGATATGA TTATGAATAC AGCAGGAATG GTACCTGTAA TATTTTCATG 
GCCAATGAAC CGTTGGTTGG AAAACGGATG GTTCAAATAA CCACAAACAG AAAAAGACCT 
GACTGGGCAA AATTCCTTGA AGAGATAGCC AATCAGTATC AGCATGCAGA ACGGATTACG 
CTGGTGTTGG ACAACCTCAA TACGCATGAG TCAGGCTCAT TATATCATAC ATTTAAACCA 
AATAAAGCAA AGGAGTTATT GGACAGGTTC GAGTTTGTGT ATACCCCAAA ACACGGAAGC 
TGGCTGAATA TGGCAGAGAT AGAATTGAGA GTTTTGACGA CTCAGTGCTT GAACCGTCGC 
ATTGAGACGA TTACAGAAGT CAAGTCGGAA GTTGCAGCAT GGGAGATGGA ACGAAACAAT 
AAAAATTCCA AGATAAATTG GCGTTTTACA AACGAAAAGG CGAGGATCAA GCTGCTACGC 
CTTTATCCGA CAATTGAGGA GTGA 

 

Protein sequence

MDESAKQLIA ETRTLIPARA GQLARYDYEY SRNGTCNIFM ANEPLVGKRM VQITTNRKRP 
DWAKFLEEIA NQYQHAERIT LVLDNLNTHE SGSLYHTFKP NKAKELLDRF EFVYTPKHGS 
WLNMAEIELR VLTTQCLNRR IETITEVKSE VAAWEMERNN KNSKINWRFT NEKARIKLLR 
LYPTIEE