Gene Ppha_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0539 
Symbol 
ID6461919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp528006 
End bp528479 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID642726825 
Producttransposase 
Protein accessionYP_002017480 
Protein GI194335686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT ACAAAGTGAC CCTGACTCAA GAAGAACGAA AGGAACTGGA AGCTCTCAGC 
AACAAAGGAA AACGCGCGGC TCAAACGATG CTGAATGCCT TGATTTTGCT TGCTTGTGAT
GAAGGCGAAT ACCAGATTGA ACGCTCAATA AATGAAACCA TTGCTAGCGT TCTGAATATC
AGCATGAAAA CGATAGACCG GGTAAAAAAG CGATTTATAG AGGAGGGTTT TGATGTGGCC
CTCACAGGAA AAGCCTCAAC ACGAGTGTAT TGCAGGAAAG CAGATGGGGA CTTTGAAGCT
CATTTGGTAG CCCTGAGCTG CTCAGCCGCA CCTGAAGGGC ATAAACGGTG GACCCTTAGA
TTATTAGCAG ATAAGGTAGT CGAACTGGAC TATGTAGACA ATATTTCCTA TGAGACCGTC
CGAAGGGTTT TAAAAAAAAC GTCATTAAGC CTTGGAAAAA GGATGGATGG ATAA
 
Protein sequence
MKKYKVTLTQ EERKELEALS NKGKRAAQTM LNALILLACD EGEYQIERSI NETIASVLNI 
SMKTIDRVKK RFIEEGFDVA LTGKASTRVY CRKADGDFEA HLVALSCSAA PEGHKRWTLR
LLADKVVELD YVDNISYETV RRVLKKTSLS LGKRMDG