| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0487 |
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| Symbol | |
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| ID | 6462069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 476562 |
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| End bp | 477644 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642726775 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002017430 |
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| Protein GI | 194335636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCCC TACAGAAATT TCTTCCCAAA TATACCATAG CTCTTGCTCT CCTTTTTCTT
GCCACGGTCA TTTTTCTGAT GACGAGGGGC AACACCGTCG ATATTGAGGT CGATCAGGTG
ACCAATGCAG AGCTGGTTCA GGCAATCTAT GCAACCGGCT TTGTTGAGGC CGAAGCAGTA
GCCAACCTCA GCGCTGAAAC ATCGGGCACG GTACGCTCTG TCGGTGCACT CGAAGGGGAG
CATGTAACCG CTGGTCAGAA AATTCTTCAA TTCAGCAGCC CCCAGCCAGA GTTCGCCGTT
CGTGAAGCAA AGGCTGCCCT GGCCGAACAG CAGGCTCAGA CCCACGACAA CAAGCTGCGG
CGAACCAGAA AGGAGAACCT CTTCCGTGAA GGCGCAATAT CGCGTCAGGA GCTGGATGAG
GCCGAAAAAA TGAGCATCCA GGGCGAAGAG CTGCTCCGGC AGAAAGCCCT TCAGTTGCAG
ATGCGTGAAG ATGACCTGAA AAAACTGACA GTCAGCGCCC CTTTTGCCGG TATTCTCACC
CTCCAGAGCG TCAAAGAGGG CGATTATGTC GCAGCCAACA GCCTTGTCGC CCGGGTTGTT
GACCCATCGG CCTATGTGGT TACCGTCGAG GTTGACGAAC TCGATATTCC CCGTATACGC
TTCGGTCAGG CGACGACCGT TGCCTTTGAT GCCTGGCCCG ACAAGCGCTT CAAGGCCACC
GTCTCCCGTA TTGTACAGCA AACAGACCGG GTCACAAAGA CCTCAAGGAT CTATCTGAAG
CTCGACCATC CAGCCACCGA CATTCAGGCA GGTATGACCG CAACAGCAAA CATCATCTAC
AATATCAGGC CGAATGCCCT TCTGGTCAGA AAAAGCTCGC TCTTTGAAGA AAACGCACAG
AGCACTGTCT GGAAAATTGC AAACGGCAAA CTCAAAAAAC AGCCAGTTCG GACAGGAGCA
AGCGACTTGA CCTTTGTTGA AATCTTGCAG GGGCTCAAAA AAGGCGACAA GATTGCACTT
GCACCCGCAA AAAATTTACG TGAAGGCATG GAGGTCAACA CCATTTCCCC CAGGAAAAAC
TGA
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| Protein sequence | MQSLQKFLPK YTIALALLFL ATVIFLMTRG NTVDIEVDQV TNAELVQAIY ATGFVEAEAV
ANLSAETSGT VRSVGALEGE HVTAGQKILQ FSSPQPEFAV REAKAALAEQ QAQTHDNKLR
RTRKENLFRE GAISRQELDE AEKMSIQGEE LLRQKALQLQ MREDDLKKLT VSAPFAGILT
LQSVKEGDYV AANSLVARVV DPSAYVVTVE VDELDIPRIR FGQATTVAFD AWPDKRFKAT
VSRIVQQTDR VTKTSRIYLK LDHPATDIQA GMTATANIIY NIRPNALLVR KSSLFEENAQ
STVWKIANGK LKKQPVRTGA SDLTFVEILQ GLKKGDKIAL APAKNLREGM EVNTISPRKN
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