| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0443 |
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| Symbol | |
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| ID | 6462202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 427262 |
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| End bp | 428404 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726730 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002017386 |
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| Protein GI | 194335592 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAA AGCTTTTTGT ATTAGCAGGT GAGCTCTCCG GTGATATGCA TGCAGCCGGA
GTCATCACTG AACTGCTGAA AGCAAGGCCT GAACTCAAGG TTTTTGGTAT CGGTGGTGAA
AAACTGCGCA CTCTTGGAGC AGAGTTGCTC TACGACACTG CGCAGATGAG CATCATGGGT
TTTCTTGACG TGCTCAAACA TGCCGGATTT CTTCGTCGGG TTATTCGGGA ACTCAAGGAA
GCCATACGTC GTGAAAAACC ACAGGCAGCC TTTCTTGTTG ACTATCCAGG CATGAACCTC
ATGATGGCCC GTTTTTTTCA TCAACTCGGT ATTCCGGTTA TCTACTACAT CTCCCCCCAG
GTTTGGGCAT GGAAAGAGGG TCGGGTAAAG GCGATCCGGC GTGATGTTGA TCGGCTCCTT
GTTATCTTCG ATTTCGAGGT TGAATTTTTT CGACGCCATG GTATCAATGC AGAATTTGTC
GGTCATCCCG TTATCGAGCA GCTTGCAGAA CTCTCACTGC CATCCAGAGA GCTTTTTGTA
CAGAGATATA ATCTGGCGCC GGATACCCTT CTGATCGGTC TTCTTCCAGG AAGTCGCAAG
CAGGAGATTG CTCACATTTT ACCGGAAATG CTGAAAGCAG CCCGTCTGCT GAGCCAAAAT
TACCGTGTGG TTTTTCTCTT CGGACGCGCA CCGCACCTCG ACGAAGAGGT TTACCATGCA
TGGTCGGCAT ATCCGGATCT TTCCGTTATC AACTGTTCGG CTTATGAAGT CATGCAGTAC
AGCGATCTTG CACTGGTCAC CTCTGGTACC GCAACGCTTG AATCACTCTG TTTCGGTGTA
CCAATGGTAG TTGTCTACAG GACAGGATGG CTTAATTACC TGATTGGTCG TCAGTTGGTA
AAGCTGACAA GCATTTCACT TGCCAACATT GTAGCCAAAG GGCTCGGAAG CAGCGAAAGG
GCCGTGCCCG AACTTATCCA GCATGAGGCC AGTGGAACGG AGATATACCA GACTGCCTGC
ACAATCCTTG ACGATCCCGA AAAAGCCGGC ACGATGCGCC GCGAGCTGCT TGCAGCAAGG
GAAAGGCTTG CCAGCGACTC ACCTTCACAC AAAATTGCGG CGATTCTGCA GGAATATCTT
TAA
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| Protein sequence | MSKKLFVLAG ELSGDMHAAG VITELLKARP ELKVFGIGGE KLRTLGAELL YDTAQMSIMG
FLDVLKHAGF LRRVIRELKE AIRREKPQAA FLVDYPGMNL MMARFFHQLG IPVIYYISPQ
VWAWKEGRVK AIRRDVDRLL VIFDFEVEFF RRHGINAEFV GHPVIEQLAE LSLPSRELFV
QRYNLAPDTL LIGLLPGSRK QEIAHILPEM LKAARLLSQN YRVVFLFGRA PHLDEEVYHA
WSAYPDLSVI NCSAYEVMQY SDLALVTSGT ATLESLCFGV PMVVVYRTGW LNYLIGRQLV
KLTSISLANI VAKGLGSSER AVPELIQHEA SGTEIYQTAC TILDDPEKAG TMRRELLAAR
ERLASDSPSH KIAAILQEYL
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