| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0438 |
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| Symbol | |
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| ID | 6462208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 422660 |
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| End bp | 424174 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642726725 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002017381 |
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| Protein GI | 194335587 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCAA AGTTAAAGCT TCTTTTCAAA GATACCGTCA TCTACGGTTC AAGTACGATA
TTGGCCCGCA GTCTCAATTA TCTGCTGGTT CCCCTCTATG CAAACAAACT TTCAACGTTT
GACAATGGGG TACAAACCAT CATTTATGCC AATATTGCTC TGGCAAATGT TCTTTTTTCC
TATGGCCTTG AGACCTCATA TCTCAAGGTC GTTTCCGATT CGGCAGATCA TGAGAGGGAT
GAGACGCAGC TTTTTTCAAC AGCTTTTCTG ACACTTTTCC TCACCTCAAC CCTGTTTGCT
GTCGGCATTG CGCTTTTTGC GCCGCTCCTT GCCCAGCTCA TAGGGCTCTC TGCGGGAGAT
TATCTTTTTG TCCGCTATGC AGCCCTTATT TTATGGCTTG ACACCCTGCT GGTCATTCCC
TTTGCAGAAC TTCGCCTCAA AAGAAAAGCC TTGCAGTTTG CCATCGCCAG AGTAGCAGGT
GTGGTAGCGG TTGTTATCAG TGCGGTGATT CTTATTGTTC CCCTCAATGC CGGTTTGCCA
GGCGTCTTTA TTGCAGAGGC ATTCGGATCC CTGATCAGCC TTCTGCTGGT CATTCCGGTT
CTCCGTCAGT TCAGGCTCTT TTTTTCAGCC GACCAGTTGC GTTCCATGCT TCGCATAGGG
CTGCCCTATG TGCCGACAGG GATCGCCGGA CTTCTGATTC ATCTTATTGA TCGCAATATT
TTAATTCGCA TATCCCCCTC AACAATTGAG CGTATTTATG GAAAAGGCTA CCAGCCCTCC
GATATTGTCG GTATTTATGG AAGAATTGCT GCGTTTGGTG TGGTGCTCCA GCTCTTTATC
CAGGTTTTCC GCTTTGCGTG GCAGCCTTTT TTTCTTCAGC ACTCCAAGGA TCCGGATGCA
AAACAGTTGT TCCGGCATAT ACTGAGTATT TCAACCCTTT TCACCATGTT CCTGGCGCTT
GCAGCCACCT TTTTTGTGCC TGATCTGGTT CGCTATCACT ATGGTGGAAG TTTTTACCTG
CTCCCTCCCC GCTACTGGAT CGGGCTATCA ATTTTGCCGT GGATTTTTTT GAGTTACGTT
TTTGACATGA TCTCAACCAA CCTCTCTGCA GGACTTCTTA TTACCGGAAA CACCCGTTAT
CTGCCTGTCG TCACCTTTGC CGGCGCTGCT GTAACAGCGT TTTTCTGCTG GTGGCTTATT
CCTCTGCGAG GCATGGATGG CGCCGCTTAT GCTATTGTGG CAGGAACGGC TGTCATGTCT
GTTGTCATGG CCTGGTACTC ACTAAAAGTT TTTCCGCTCC GCCATGACTG GCTTAAACTG
TTTTTGCTGC TTGTAACGGC TGTTGCGATG GCATCAGTTC AGTTCCTTGC AGGGTCTGAG
CTGCCCCAGG CCGGGGTTGT TTTTGCCTTC AAAATCGGGT TGCTCACCCT CTACCTTCTT
ATTGCAGCGG CCCTTTTTCG TCATGAGGCG CGGCTTGTTG CTGTTAAAGC AGGGCAAAAA
TTCCGCAGGA GGTGA
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| Protein sequence | MFSKLKLLFK DTVIYGSSTI LARSLNYLLV PLYANKLSTF DNGVQTIIYA NIALANVLFS
YGLETSYLKV VSDSADHERD ETQLFSTAFL TLFLTSTLFA VGIALFAPLL AQLIGLSAGD
YLFVRYAALI LWLDTLLVIP FAELRLKRKA LQFAIARVAG VVAVVISAVI LIVPLNAGLP
GVFIAEAFGS LISLLLVIPV LRQFRLFFSA DQLRSMLRIG LPYVPTGIAG LLIHLIDRNI
LIRISPSTIE RIYGKGYQPS DIVGIYGRIA AFGVVLQLFI QVFRFAWQPF FLQHSKDPDA
KQLFRHILSI STLFTMFLAL AATFFVPDLV RYHYGGSFYL LPPRYWIGLS ILPWIFLSYV
FDMISTNLSA GLLITGNTRY LPVVTFAGAA VTAFFCWWLI PLRGMDGAAY AIVAGTAVMS
VVMAWYSLKV FPLRHDWLKL FLLLVTAVAM ASVQFLAGSE LPQAGVVFAF KIGLLTLYLL
IAAALFRHEA RLVAVKAGQK FRRR
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