| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0413 |
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| Symbol | |
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| ID | 6462290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 395853 |
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| End bp | 396866 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726700 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_002017358 |
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| Protein GI | 194335564 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TTACCATGCA TGAAGCCCTG ACACAGGAAC TTGTCGAGAA CAAGTACCGT
CTTTACCTGT CGAGAATCAA TAGTGCTCTC GGAAACTGTT TCGTCAGGGA GAGCCCGATC
ACCCTGTACG CTCCGGCCAG ATATATTCTT GAAGGAAAAG GAAAGAGAAT CCGTCCGTTT
CTTACACTGC TTGCTTCGGA GGCCGTATGC GGCTCTTCGG AACATGCGCT CAATGTTGCA
CTTGCGGTTG AAATCCTCCA TAATTTCACC CTGATTCATG ACGACATCAT GGATCAGGCG
GAGCTCCGCC ACGGCAGACC GACCGTGCAC CGGCGGTGGA ACACCAATGC CGCTATCCTC
ACGGGTGATA TGATGATTGC CTACGCCTAT GAACTCGCCC TTGAGGCACA AAGTGAACGG
CATGGAGAGC TGGTGCATAT TCTCAATGAT GCCAATATCA CTATTTGTGA AGGCCAAGCC
CTTGATATAG AGCTTGAAGA GAAAAATGAT GCCACAATTG CCGACTATCT CGACATGATC
GCAAAGAAAA CCGGACGGCT TATTTCAGCC GCTCTTGAAG CTGGTGGCGT TGCGGGCGAT
GCGACGGATG AGCAGTTGCG GAGTCTGGTG CTTTTCGGTG AAAAAATTGG CCAGGCGTTC
CAGATACAGG ATGATTATCT TGACATCATG GCCGAAGATG GAAAGTCCGG GAAGATGGCT
GGCGGTGATA TCATCAATGG TAAAAAAACC TATCTCTTGC TGCGCTCTCT TGAATTGACG
TCAGGCAAAG AGCGTGATCT GCTGAACTTC ATCATCAGCA ATAAAGGCAT TGAGGCCCAG
AGAGTTCCTG AGGTTAGGGC TATCTATCAA CAGTGCGGCG TCCTGGAAGA GACGGCATCA
CTGATTAACC GTACGACCGA AGAGGCGCTC TCGGCAATTG ACGGGCTCCC CTATGCGGAA
GGACGAGAGT ATCTTAAAGG ATTTGCGAAT ATTCTGATGA AGAGGGACTT CTAA
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| Protein sequence | MSDFTMHEAL TQELVENKYR LYLSRINSAL GNCFVRESPI TLYAPARYIL EGKGKRIRPF
LTLLASEAVC GSSEHALNVA LAVEILHNFT LIHDDIMDQA ELRHGRPTVH RRWNTNAAIL
TGDMMIAYAY ELALEAQSER HGELVHILND ANITICEGQA LDIELEEKND ATIADYLDMI
AKKTGRLISA ALEAGGVAGD ATDEQLRSLV LFGEKIGQAF QIQDDYLDIM AEDGKSGKMA
GGDIINGKKT YLLLRSLELT SGKERDLLNF IISNKGIEAQ RVPEVRAIYQ QCGVLEETAS
LINRTTEEAL SAIDGLPYAE GREYLKGFAN ILMKRDF
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