Gene Ppha_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0396 
Symbol 
ID6462349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp381260 
End bp381781 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content46% 
IMG OID642726684 
Producthypothetical protein 
Protein accessionYP_002017342 
Protein GI194335548 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0150175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGC GCATCAATAA TTGTGTCACC CAGGTTTTGG CAGAGTCCGC CGGTACGAGA 
GGTGAAGGGG CTTATCTTAT TGATATAAAA GTAAAAGGAA AGGGAAGCGG TCGGAAGATA
GAGATCCTGA TGGATGCCGA TGATGGTATT CGCATCCATC AGTGTGCATA TATCAGCAGA
AGAGTCAGGG AGCGGATTGA AGGTGATGAT GATCTTCTTG AGCTTGTTGG CGAAAATTTT
GACCTGATGG TCTCTTCTCC TGGTCTTGGA GAACCCATCA TTATTCCCCG TCAGTATATA
AGGCATGTTG GAAAGCTGTT GCAGGTTACC TATGCCGACT CAAACGGCGA TCCTGTAGAG
CTTGTCGGTC ATCTTCAGGA GGTATCGCTT TTGGATGAGC ATGGGGCAAA AATTGTGATC
ATGCCGGAAC AGAAAAAAAA GAAAGGTCAA CAGCCAAAAA CAGAAGCGGT CATATTGTAC
CTCAATCAGG TAATCCGTGC GATTCCTGAG GCGGAATTAT AA
 
Protein sequence
MQERINNCVT QVLAESAGTR GEGAYLIDIK VKGKGSGRKI EILMDADDGI RIHQCAYISR 
RVRERIEGDD DLLELVGENF DLMVSSPGLG EPIIIPRQYI RHVGKLLQVT YADSNGDPVE
LVGHLQEVSL LDEHGAKIVI MPEQKKKKGQ QPKTEAVILY LNQVIRAIPE AEL