Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0396 |
Symbol | |
ID | 6462349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 381260 |
End bp | 381781 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642726684 |
Product | hypothetical protein |
Protein accession | YP_002017342 |
Protein GI | 194335548 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0150175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAGC GCATCAATAA TTGTGTCACC CAGGTTTTGG CAGAGTCCGC CGGTACGAGA GGTGAAGGGG CTTATCTTAT TGATATAAAA GTAAAAGGAA AGGGAAGCGG TCGGAAGATA GAGATCCTGA TGGATGCCGA TGATGGTATT CGCATCCATC AGTGTGCATA TATCAGCAGA AGAGTCAGGG AGCGGATTGA AGGTGATGAT GATCTTCTTG AGCTTGTTGG CGAAAATTTT GACCTGATGG TCTCTTCTCC TGGTCTTGGA GAACCCATCA TTATTCCCCG TCAGTATATA AGGCATGTTG GAAAGCTGTT GCAGGTTACC TATGCCGACT CAAACGGCGA TCCTGTAGAG CTTGTCGGTC ATCTTCAGGA GGTATCGCTT TTGGATGAGC ATGGGGCAAA AATTGTGATC ATGCCGGAAC AGAAAAAAAA GAAAGGTCAA CAGCCAAAAA CAGAAGCGGT CATATTGTAC CTCAATCAGG TAATCCGTGC GATTCCTGAG GCGGAATTAT AA
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Protein sequence | MQERINNCVT QVLAESAGTR GEGAYLIDIK VKGKGSGRKI EILMDADDGI RIHQCAYISR RVRERIEGDD DLLELVGENF DLMVSSPGLG EPIIIPRQYI RHVGKLLQVT YADSNGDPVE LVGHLQEVSL LDEHGAKIVI MPEQKKKKGQ QPKTEAVILY LNQVIRAIPE AEL
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