Gene Ppha_0384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0384 
Symbol 
ID6462372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp370487 
End bp371641 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content49% 
IMG OID642726672 
Productglycosyl transferase 
Protein accessionYP_002017330 
Protein GI194335536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTCA GCGGCTATTT GCTTTTTTTT ATCAGTCAAG GAGGCTCAGC GGCGGGAAAT 
AATCCGGCCA GGGAAAGTGG ATTGTCGCTG AACACTCGGT ATTACCTTAT GTTGTTTGTT
ATGGCATTAA AGATTCTTTG TTTGCATGTT GCGGAAGATC AGGCGAGTTA TCGCTACCGG
GTTGAGCAGT TTCTTCCGTT CTGGGAGGAG TATGGTATTG AGATGCATAC AGTGCGTATT
ACCGGAAAAA GCTATCCTGA AAAGCTGCGC CTTGCGCTTG GGAGTAAAAA GTATGATTAT
GTCTGGCTTC AAAGAAAGCT GCTGGCTCTT TTTTTTATTA CACTTATAGC GAGACGGTCA
CGACTTCTGT ATGACTATGA TGATGCGTTG TATGCGAGGG AGAGCTACAT AGATGGGTTA
CCGAAGAAGC CGACAAAACC TGGTTCGAAA CAATCCATTA GTCGCCTCAA TAGCCTGTTG
AAGCGAACCT CGATGGTGTT TGCTGGAAGT GATGCGCTCG TCAATTATGC CCGACAGTTT
AATCCTGATG GTACTTTTCT TGTCCCAACG GCATTCAGCA AAGTGCCTGA ACTTCCGGTG
CGCGTTTCCT GTTCTGACGA CAGGGTTACT TTTGGCTGGA TCGGCAATAA CCTGAATCTC
TTTTTTCTTT CGCTTATTGA TGACGCTGCC TCTTCGTTGC AGGCTCGTTA TCCGGCAGTC
CGGTTTTCAG TGATGAGTGG CAAACCTCCC GAAGGGCTGA AAACCTGCTG GAATTTTGTT
TCCTGGTCGA AGGAGGCAGA AGTGGAGTGG TTAGAATCTA TTGATATCGG TATGATGCCG
CTGGTTGATG ATGAATGGAG CCGGGGGAAA TGTGCTTTCA AGCTCTTGCA GTACATGGCT
CATGGCAAAC CGGTGATTGC ATCGGCTGTC GGGGCTAACC GTGCTGCCGT AATTGATGGT
GTCAGCGGCT ACCTTGCCTC ATCCTCTGCG GAGTGGCTTG CTGCGTTCGA GTCGTTGGTG
ACAAGCCCGG ATCGACGTCG TGCAATGGGT AAGGAGAGCT GCAAACATTT TCTGCAAACC
TACGAGCGGC AAAAGGTGCA GGAGCAGATG GCTGATCTGC TGCATCGCCA TTTCAACCAG
ACGCAACAAC ACTGA
 
Protein sequence
MPVSGYLLFF ISQGGSAAGN NPARESGLSL NTRYYLMLFV MALKILCLHV AEDQASYRYR 
VEQFLPFWEE YGIEMHTVRI TGKSYPEKLR LALGSKKYDY VWLQRKLLAL FFITLIARRS
RLLYDYDDAL YARESYIDGL PKKPTKPGSK QSISRLNSLL KRTSMVFAGS DALVNYARQF
NPDGTFLVPT AFSKVPELPV RVSCSDDRVT FGWIGNNLNL FFLSLIDDAA SSLQARYPAV
RFSVMSGKPP EGLKTCWNFV SWSKEAEVEW LESIDIGMMP LVDDEWSRGK CAFKLLQYMA
HGKPVIASAV GANRAAVIDG VSGYLASSSA EWLAAFESLV TSPDRRRAMG KESCKHFLQT
YERQKVQEQM ADLLHRHFNQ TQQH