| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0360 |
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| Symbol | |
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| ID | 6462569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 345090 |
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| End bp | 346454 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642726648 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002017306 |
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| Protein GI | 194335512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG AAAGGTTTCA AGACCTTCAG GGACTGGTAA AGCAACAGTC TCTGATGATG
GATTCAGTGC CAATTCAAAT GTGGTTTCTT ACAGACATCT TCACATATGG GCGCGTGAAT
CAGTGCCATG CAGATTTTAT GGGAATGCGC AAGCAGGCTA TAGAATTCAA AGCACTACGT
TATCTGTTTC CGGCAGATGT TGCTGCCCTG TGCGAGCAAT CGAACCGCCA AGTGCTTGAA
ACACGCAACA CCGTAGTCTC CGAAGAATGG CTAACAGATT CAAATGGAGT ACGGCATCTA
CTGGAAATTA CAAAGACACC CAAGTTTGAC AACAACGGAA GTGTTCAATA CATCGTTTGT
TGTGCAATAA TCATCACGGA ACAGAGATCG GCGGCGGCCG CACTCAAGCA ACACGAAGAA
AATTTTCGAT CTTTCATTGA AAAAACATCA GATATTGTTG TAATCGGTAA TTGCGACGGA
AAGATTATAT ACTCTAATCC CGTAACCTCT GATAAATTGG GTTACAGTTC CGATGAATTG
CGCACCATAC AAATACTTGA TCTACATCCT AAGTCGGTTC AGCAAGAAGC TACATCCATT
CTAACTGATA TGTTCACCGG CAAACGGACA ACTTGCCCCT TGCCACTTAT GCATAAGAAC
GGCACCATCC TTCCCGTTGA AACGCGGGTA TGGTTTGGGA AATGGAACGG AGCAGATTGT
ATTTATGGCG TTTCACAAGA CCTTGGCAGA GAACAGGAGG CTTTGCAAAA GTTTGACAAA
CTCTTCAGAA TGAACCCTGC CTTGATGGCT GTAAGCAGCA TTCCTGATAG AATATTTACT
GATGTCAACG ATGCCTTTCT TCGCATACTT GGTTATTCCG CAGACGAGAT TATCGGCAAG
ACAGGCTCGG AAATAGGTAT ATTTGCGAAT GAAGAAGAAC AGGAACGGGT CGCCAATACA
CTCGCTTGCT ATGGCAATAT CCATGAAGTT GAACTAAAAG TAAAAACAAA GGCAGGAGTT
GTTCTCGATG GTCTTTTCTC GGGCGACATT ATCGAGAGTC AAGGTGTTAA GTATTACCTG
ACGGTTATGA TTGATATAAC TGAACGTAAA CAAGCAGAGG CAGAACGTCA ACATACCATT
AAAGAACTCC GTCATGCATT AAATGAGATT AAGACATTGC GCGGCATTGT TCCTATTTGC
GCAAGCTGCA AAAAGATCAG GGATGATAAA GGGTACTGGG AGCAAGTTGA AGCGTATGTT
GCAAAACACA CAGAGGCGCA TTTTTCCCAC GGTATATGTC CCGAATGTAT GACAAAATTG
TATCCGGAAT TCTGCAAGAA AAAAGATATT GGAATAACAG GATAG
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| Protein sequence | MNDERFQDLQ GLVKQQSLMM DSVPIQMWFL TDIFTYGRVN QCHADFMGMR KQAIEFKALR
YLFPADVAAL CEQSNRQVLE TRNTVVSEEW LTDSNGVRHL LEITKTPKFD NNGSVQYIVC
CAIIITEQRS AAAALKQHEE NFRSFIEKTS DIVVIGNCDG KIIYSNPVTS DKLGYSSDEL
RTIQILDLHP KSVQQEATSI LTDMFTGKRT TCPLPLMHKN GTILPVETRV WFGKWNGADC
IYGVSQDLGR EQEALQKFDK LFRMNPALMA VSSIPDRIFT DVNDAFLRIL GYSADEIIGK
TGSEIGIFAN EEEQERVANT LACYGNIHEV ELKVKTKAGV VLDGLFSGDI IESQGVKYYL
TVMIDITERK QAEAERQHTI KELRHALNEI KTLRGIVPIC ASCKKIRDDK GYWEQVEAYV
AKHTEAHFSH GICPECMTKL YPEFCKKKDI GITG
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