| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0318 |
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| Symbol | gidB |
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| ID | 6463499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 302986 |
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| End bp | 303672 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726610 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_002017268 |
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| Protein GI | 194335474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.309267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACGAA TGAATGATAA TGTGTTGACC CTGCAGATGT TATGTGCTGA ACAGGGGATG
GAGATTGATC TCCCGACACT TCAGCAACTG GCACGATATG GTGATTGCCT TGAGCGATGG
AATCACAAGA TAAACCTGAT CAGTCGGAAG GAAGATGCTC CGGTCATTAT CAAACATATC
TTTCACTCGC TCCTGATCAC TCTCTACCAC TCTTTCCGCG AGGGGGAAGA TGTTCTTGAT
CTGGGAACTG GTGGAGGATT ACCAGGTATT CCGCTCTCTC TTCTCTTCCC CCGTACTCGT
TTTCTTCTGG TGGATGCGAC GGGGAAGAAA ATTGCAGCCT GTCAAGCCAT GATTACAGAG
CTGGGCATCA ACAATGCTAT TGCTCTGCAT ACGCGGGTAG AAGAGCTTAA AGGTGTTGTG
TTTGATACGG TTCTTTCAAG GCAGGTTGCT CCTCTTGACA AACTCTGCTC TTACTCAGCA
CCTCTTCTGA AAGCTGGCGG AACCCTGATT TGCCTGAAGG GGGGAAATCT TGAAAATGAG
ATTGCGGCTG CCATGAAGTC AAACAAGGGG CAGGAGGGTT TCCCTTCAAA AGTTGAACTG
CATCCTATCC ATGGCATCAG CCCCTTTTTC TCTGAAAAGC AGATAGTCAT TGTCCACGGA
AAGAACTCTT CCGCAAACAA TGACTGA
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| Protein sequence | MERMNDNVLT LQMLCAEQGM EIDLPTLQQL ARYGDCLERW NHKINLISRK EDAPVIIKHI
FHSLLITLYH SFREGEDVLD LGTGGGLPGI PLSLLFPRTR FLLVDATGKK IAACQAMITE
LGINNAIALH TRVEELKGVV FDTVLSRQVA PLDKLCSYSA PLLKAGGTLI CLKGGNLENE
IAAAMKSNKG QEGFPSKVEL HPIHGISPFF SEKQIVIVHG KNSSANND
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